Gavia stellata (red-throated loon): 104261105
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Entry
104261105 CDS
T08384
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gste01009
]
104261105 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gste03021
]
104261105 (CTDP1)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104261105 (CTDP1)
Protein phosphatases and associated proteins [BR:
gste01009
]
HAD phosphatases
Fcp/Scp phosphatases
104261105 (CTDP1)
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104261105 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BRCT
PTCB-BRCT
NIF
RTT107_BRCT_5
LIG3_BRCT
DUF7373_C
Motif
Other DBs
NCBI-GeneID:
104261105
NCBI-ProteinID:
XP_009815323
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
FLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCGDSMVCIIDDREDVWKFAPNLITVK
KYVYFQGIGDINAPPGSREIQMKKKVNHSTKPEALDSAVTPAKDAEEVKNVTCVEEQSNG
LKKGTKDTCTANGSTSVSSETSDWDMNSRDKVNAQDSLNDSTDHKMDSEVTNDLTNAKES
QTFSEQVDRTAIEKQQTQDKTTNDLDFELSSDSESDGGLDTRKSSTSVSDSENEEKRSWK
KSKQPLQEENLQKGSCADASEKKDGLVNHSGDTQSLPSENTHDKTDLEAQEESEQESLCD
LGNGCADKKEAETESQNSEQSGITMGESLDQSMEEEEEEDDTDDDDHLIYLEEILVRVHT
DYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVTIIFSGLYPTNFPIEKTREHYHATA
LGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQAQDCKDLHVVNPDWLWSCLERWDKVE
EQLXXXXXXXQKNLRGNSPATFPETHSTFQTALFHPTPIHPKSQPGPEVRLYDPNTGKLI
RKGAQTSGQSMYIQSPAPPITLPVHGEHSSFRYLKHS
NT seq
1736 nt
NT seq
+upstream
nt +downstream
nt
gatttttggaccctgaaaagaagcttttttcccatcggatattgtcaagggatgaatgta
ttgatccgttttctaaaactgggaatcttagagacctcttcccgtgtggggattccatgg
tttgcatcattgatgatagagaggatgtttggaagtttgcacccaatttgataactgtga
agaaatatgtatactttcagggcataggagatattaatgcacctcctggatcaagagaaa
ttcaaatgaagaagaaagtaaaccactctacaaaaccagaggcactggattcagcagtga
caccagcaaaagatgctgaagaagtaaagaatgttacatgtgtagaagaacaaagcaatg
gtctcaagaaaggtacaaaggacacttgcactgcaaatggaagtacttctgtaagcagtg
aaacatctgactgggatatgaactctcgcgataaagttaatgcccaggactccctaaatg
atagcactgatcacaaaatggacagtgaggtcactaacgatctgacaaatgcaaaagaat
ctcagactttttcagaacaagttgatagaacagcgatagagaagcagcaaacccaagaca
agacaacgaatgacttggactttgaactgtctagtgacagtgaaagtgatggtgggttgg
ataccagaaagtcatccacttctgtatcagatagtgagaacgaggaaaagagaagctgga
agaaatccaaacaacctctgcaagaagaaaatttgcagaaagggagttgcgctgatgcaa
gtgagaaaaaggatggtctggtgaaccattctggggacacgcaatctctacctagcgaaa
atactcatgacaaaactgatcttgaagcacaagaagaaagcgaacaggaaagcctttgtg
atttaggaaatgggtgtgcagacaagaaggaagctgaaacagagtctcagaatagcgaac
agtctggaattacaatgggtgagtccttagaccagagtatggaggaggaagaggaggagg
atgatacagatgatgatgaccatttaatatacctcgaagagatccttgtgcgggttcaca
ctgattattacacaaagtatgataaatacctgaaaaaagagattgaggaaattccagaca
taagaaaaatagtaccagaactgaaaagtaaagtgttggcagatgtaaccataatattta
gcggactctacccaacaaacttccccattgagaaaacacgggaacactatcacgccacag
cacttggagctaaaattgtgaagaatctagtactgagtgctgatgatcctgacaaagcaa
cgcatctcattgcagcaaggacaggcacagaaaaagtacggcaagctcaggactgcaagg
acctccatgttgtaaaccccgattggctgtggagctgcctggagcgctgggacaaggttg
aggaacagctcnnnnnnnnnnnnnnnnnnnnacagaaaaacttaagagggaacagccctg
ccacgtttcctgagacacacagcacatttcagacagctctgtttcacccaacacccatcc
atccaaagtctcaacctggtcctgaagttcgactttatgatcctaacactggaaagctaa
tcaggaaaggcgctcagacctctggtcagtcgatgtacatccagtctccagctcctccca
tcaccttaccagtccacggcgaacactcgtccttcaggtacctaaagcatagctaa
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