Gavia stellata (red-throated loon): 104261227
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Entry
104261227 CDS
T08384
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gste03009
]
104261227 (DCAF13)
04121 Ubiquitin system [BR:
gste04121
]
104261227 (DCAF13)
Ribosome biogenesis [BR:
gste03009
]
Eukaryotic type
90S particles
Other 90S particles
104261227 (DCAF13)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104261227 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
MIOS_WD40
Beta-prop_IFT140_1st
KNTC1_N
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
104261227
NCBI-ProteinID:
XP_009815487
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
TNFETVGTAKILVLQQILPWQENQREELLNLAYLELHYVRWVFNVCVTLIAVPRNYDPAL
HPFEVPREYTRALNATKLERVFAKPFLSSLDGHRDGVNCMAKHPKSLSTVLSGACDGEVK
IWNLTKRQCIRTIQAHEGFVRGMCARFCGTSFFTVGDDKTVKQWKMESPEYGEEEEPIHT
ILGKTVYTGIDHHWKEAVFATCGHQVDIWDEQRTSPMCSLTWGFDSISSVKFNPIETYLL
GSCASDRNIVLYDMRKSTPLKKVILNMRTNTLCWNPMEAFVFTAANEDYNLYTFDMRFLE
SPVTVHMDHVSAVLDVDYSPTGKEFVSASFDKSVRIFPVEKGHSREVYHTKRMQHVITVK
WTSDNKYILCGSDEMNIRLWKANASEKLGVLAPREKAAMNYNQKLKEKFQYHPKIRRIAQ
HRHLPKSIFCQIKEQRIMREARRRKELNRRKHSKPGSVPFVSERKKHIVAVVK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
accaatttcgaaacagtaggaacagcaaaaattttagtgttgcagcaaattctcccatgg
caggaaaatcaaagagaagagcttctgaatttagcttatcttgaactacactatgtacga
tgggtttttaatgtgtgtgttactcttattgcagttccaagaaattatgaccctgcattg
catccgtttgaggttccacgagagtacacaagagctctgaatgcaacaaagctagaacgt
gtgtttgcaaaaccctttcttagctcgcttgatggccacagagatggagttaattgcatg
gccaaacatccaaagagtttgtctacagtgctgtctggagcttgtgatggagaggttaaa
atttggaacttgaccaaacgacagtgtattcgtactatacaagcccatgaaggctttgtt
cgaggcatgtgtgctcgtttctgtggtacatcattctttactgttggcgatgacaaaact
gtgaagcagtggaaaatggagagcccggagtacggagaagaagaagaacctattcataca
attcttggaaagacagtatatacaggaattgatcaccactggaaggaagctgtttttgcc
acctgtggccatcaagtggacatttgggatgagcaaaggacaagtcccatgtgttctctg
acatggggctttgatagcataagcagtgtaaaatttaatcccattgagacataccttttg
ggaagctgtgcctctgacagaaacattgtgctatatgatatgagaaaatcaacaccatta
aagaaggttatcttgaacatgaggacaaatacactgtgttggaaccccatggaagctttc
gtttttactgcagcaaatgaagattacaacttatatacttttgatatgcgcttccttgaa
tcacctgtgacggtgcatatggatcacgtgtctgctgttcttgatgtggattattcaccc
actgggaaagaatttgtctctgccagctttgataagtctgtccgcatttttcctgtagag
aaaggtcacagcagagaggtatatcatacaaagcgaatgcagcacgtcatcactgtaaag
tggacttcagataacaaatacattctgtgtggctcagatgagatgaatattcgtctgtgg
aaagctaatgcttctgaaaaattgggagtgcttgcaccacgagagaaggcagctatgaat
tacaatcagaagctgaaggagaagttccagtatcacccaaagatcaggcgcatagctcaa
caccgtcacttgcctaaaagtatattttgccaaatcaaggagcaacgtattatgagagaa
gctcgtcgtcgaaaggaactgaatcgtcgtaagcacagcaaaccaggatctgtgccattt
gtgtcagagaggaagaaacatattgtggcagtagtgaaataa
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