KEGG   Gavia stellata (red-throated loon): 104261312
Entry
104261312         CDS       T08384                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03030  DNA replication
gste03410  Base excision repair
gste03420  Nucleotide excision repair
gste03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104261312 (RFC2)
   03410 Base excision repair
    104261312 (RFC2)
   03420 Nucleotide excision repair
    104261312 (RFC2)
   03430 Mismatch repair
    104261312 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gste03032]
    104261312 (RFC2)
   03036 Chromosome and associated proteins [BR:gste03036]
    104261312 (RFC2)
   03400 DNA repair and recombination proteins [BR:gste03400]
    104261312 (RFC2)
DNA replication proteins [BR:gste03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104261312 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104261312 (RFC2)
Chromosome and associated proteins [BR:gste03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104261312 (RFC2)
DNA repair and recombination proteins [BR:gste03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104261312 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104261312 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 AAA_24 Mg_chelatase AAA_11 AAA_assoc_2 DNAX_ATPase_lid AAA_19 MipZ nSTAND3 AAA_18 AAA_5 AAA_28 ABC_tran AAA_30 AAA_25 AAA_23 NTPase_1 RuvB_N MeaB RNA_helicase SLFN-g3_helicase Rad17 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 104261312
NCBI-ProteinID: XP_009815594
LinkDB
Position
Unknown
AA seq 310 aa
MKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARL
CQKTAAPAAS
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaattatgtgaaatagttggaaatgaagataccgtgagcaggttggaggtctttgca
aaagaggggaacgtaccaaatattataattgctggtcctccaggaacaggtaaaaccacc
agcatcctctgcttggctcgtgctctgcttggtccagcattaaaggatgctgttttggag
ctgaatgcctcaaatgacagaggcattgatgttgtcagaaacaaaatcaaaatgtttgcc
cagcaaaaggtcacacttccaaaaggtcggcataaaataatcatccttgatgaagcagac
agcatgacagatggagcacagcaagcattgagaagaacaatggaaatttattctaaaaca
acgcgcttcgcacttgcgtgcaatgcctctgacaaaatcatagaacctattcagtcccgg
tgtgcagtactacgttacaccaagctaacagattcacaaatccttgcaaggctcctgaaa
attgttgagaaagaggatgtaccatatacagatgatggactagaagccattattttcaca
gcccaaggagatatgagacaggcgttaaacaacttacagtccacatattctggatttggc
tttataaacagtgaaaatgtctttaaggtatgtgacgagcctcatcctctgcttgtgaaa
gaaatgatacaacactgcataaatgcaaatattgatgaagcatacaagattcttgcccac
ctgtggcgacttggatactctccagaagatgtgattggcaacatcttccgtgtgtgtaaa
acctttcaaatgccagaatatctgaaactggaatttatcaaggaaatcgggtacactcat
atgaagatagcagaaggtgtgaactcacttttacaaatggctggactgctggccaggctg
tgtcagaagactgcagccccggcagcaagttag

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