Gavia stellata (red-throated loon): 104261432
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Entry
104261432 CDS
T08384
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104261432 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gste04147
]
104261432 (COPA)
Membrane trafficking [BR:
gste04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104261432 (COPA)
Exosome [BR:
gste04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104261432 (COPA)
Exosomal proteins of bladder cancer cells
104261432 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
TPR_COPA_B
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104261432
NCBI-ProteinID:
XP_009815749
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT
FFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTV
RVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPL
IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS
KRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDR
FLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKD
ADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYA
GTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLE
SLCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVY
CLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVAL
HFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKN
FDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAY
LTAATHGLDEEAESLKETFDPEKETIPDIDHNAKLLQPPAPVMPLDTNWPLLTVSKGFFE
GTIASKGKGGALAADIDIDTVGTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGG
WEVEEDLDLPPELDVPAGPTGAAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETA
MRLLHDQVGVTNFGPYKQLFLQTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAV
GLKLNDLIQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICRE
YIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFK
TAATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRG
KPVEKCPLSGACYCPEFHGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacccttatcgacaaattcgatgagcacgacggacccgttcgaggtattgatttc
cataaacagcagcctctgtttgtttctggaggtgatgattacaaaataaaggtctggaac
tacaaattgcgccgttgtctcttcactctgctcgggcacttggattatattcgcactacc
ttcttccaccacgaatatccctggatcttgagtgcttctgatgaccagaccattcgggtt
tggaactggcagtccagaacttgtgtttgtgtgctgacaggacacaaccactatgtgatg
tgtgcccagtttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtg
cgcgtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggaatca
gatgtcaggggaataacgggggtggatttatttgggacaacagatgcggttgtgaagcac
gttcttgagggtcatgatcgtggggtgaactgggctgccttccaccccacgatgccactt
attgtgtcgggagctgatgatcggcaagtgaagatctggcggatgaatgaatcgaaggca
tgggaggttgacacttgccgggggcattacaacaacgtctcgtgcgctgtctttcacccg
cgtcaggaactaatcctcagcaattcggaagacaagagcatccgtgtctgggatatgtct
aaacgcacgggtgtccagacctttcggcgtgatcacgatcgcttttgggtattggctgct
catcccaacctcaacctctttgctgcaggccatgacggtggcatgatcgtgttcaaactg
gagcgtgagcggcctgcttatgctgtgcatgggaacatgctgtattatgtgaaggaccgt
tttctccgccagcttgatttcaacagctcaaaagatgttgctgttatgcagctgcgaagt
ggttccaagttccctgtgttcaacatgtcatacaacccagctgagaacgctgtccttctc
tgcacaagagccagcaacttagagaacagtacttatgacctatacaccattcccaaggat
gcagactcccagaatccagatgcccctgaagggaaacgttcctccgggctaacagctgtg
tgggtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaaaaac
ctgaagaatgagatcacgaagaaggtgcaggtgccgaactgtgatgagattttctatgct
ggcacagggaacctgttactgagagatgcagactccatcaccctctttgacgtgcagcag
aagcgaactctggcctccgtgaagatctccaaggtgaaatacgtcatctggtcagctgac
atgtcccatgtagctctgcttgctaagcatgccatcatgatctgcaacagaaagctggag
tcgctgtgtaacatccatgaaaacatccgtgtcaagagcggtgcctgggatgaaagtggt
gttttcatctacaccaccagcaatcacatcaaatacgctgtcaccacaggggatcatgga
attattcgcaccctggacctgcctatctacgttacccgcgtgaaggggaacaacgtgtac
tgcctggacagagagtgccgccccagggtcctcaccattgatcccacagaattcaaattc
aagctggcgttgatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaag
cttgtgggccagtccatcattgcctacctgcagaagaagggctacccagaggtggccctg
cactttgtcaaggatgagaagacccgtttcagcctggcactggagtgtggcaacattgag
attgctctggaagcagccaaagctctggacgacaagaattgctgggagaaactgggagaa
gtggcgttgctgcagggaaatcaccagattgtggagatgtgctaccagcgcaccaagaac
tttgataggctctccttcctctatctcatcaccggcaatctggagaagcttcggaagatg
atgaagatagctgagatccgtaaggatatgagcggccactatcagaatgccttgtatcta
ggagacgtggcagagagagtgaggatcctgaagaactgtgggcaaaagtccctggcctat
ctcacggctgcaactcacggtctggatgaggaagctgaaagcctgaaggaaacatttgat
cctgaaaaggaaacgattccagacattgatcacaatgcaaagctgctgcagcctcctgct
cctgtcatgcctctggataccaactggccattgctgactgtctccaaggggttcttcgaa
ggaacaattgctagcaaaggcaaagggggtgccttggctgctgatattgatattgacact
gttggcaccgaaggctggggagaagatgcagagttgcagctggatgaagatggctttgtg
gatgctggagagggctttggagaggaaggtctaggtaaaggacaggaagaaggaggtgga
tgggaagtcgaagaagatttggatcttccccctgaactggatgttccggctggtccaaca
ggagcagcagaggatggattctttgtgccacccaccaagggcaccagcccagctcaggtg
tggtgtaacaactctcagcttcctgttgaccacattctggcaggctcctttgagacagca
atgagactcctccatgaccaggtaggagtaacaaacttcggaccctacaagcagctgttc
ctgcagacctatgctcgtggccgtacgacctaccaagccctgccgtgtctccctaccatg
tatggatacccacatcgcaactggaaagaagctggcttgaagaatgccctccctgccgtt
ggactgaaactcaatgacctgatccagcgcctgcagctgtgttaccagctcactacagct
ggcaaatttgaggaggccgtggagaagttccgctccatcttgctcagcgtgcccttgctg
gtggtggacaacaagcaggagattgctgaggcccagcagctgatagccatttgccgggag
tacattgtaggactctcaatggagattgagcggaagaagctgcccaaggagaccctggag
cagcagaagcgaatctgcgagatggctgcctatttcacccactccaacctgcagcctgtc
cacatgatcttggtgctgcgtactgctctcaacctgtttttcaaactcaaaaacttcaag
acagctgctacttttgcccgtcggctgctggagctgggtccaaagcctgaggtggcccag
cagactcgcaagatattgtcagcatgtgagaagaatcccactgacacctaccagctcaac
tatgacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctatcgtggc
aaacccgtggagaagtgtccgctcagcggagcctgctactgtcccgagttccacgggcag
atctgccgtgtcactacagtgacagagatcggcaaagatgtcatcgggctgcggatcagc
ccgctccagttccgctag
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integrated database retrieval system
