Gavia stellata (red-throated loon): 104261654
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Entry
104261654 CDS
T08384
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03015
mRNA surveillance pathway
gste04261
Adrenergic signaling in cardiomyocytes
gste04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104261654
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104261654
09158 Development and regeneration
04382 Cornified envelope formation
104261654
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gste01009
]
104261654
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104261654
03036 Chromosome and associated proteins [BR:
gste03036
]
104261654
Protein phosphatases and associated proteins [BR:
gste01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104261654
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104261654
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104261654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
104261654
NCBI-ProteinID:
XP_009816089
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MVNFEASLPSVICAMAATYRLMVTSVNCYSSVVIDQHFQHTVHYCTGTCQVFKQGVTCIV
AHHSVCAELSVQDTNLDHKIPVPENGLALTGNEDYHQILPNNPRVKKGSSVQASSSLKDI
TGEAINLASGKIKEFSFEKLKNSSSHVAYRKGRKVRSESFSRRSFDFDLIYGHFNNDENC
PPCGFLQSPSPVEKWQESNDAPEVTMNPMVPFSPHSFSEENFITQILEKHKLDGSSGGDI
KVCLDILLKCSEDLKKCTDIIKHCIKKKSADSVSGGNSNDPLANSEMIYMNLMTRFSSYL
KKLPFELKPPGHKEASDLAELVNCFHGLQQTPFPPVFGDEQPPRYEDIIQLPSSSAVPLG
LPGDQREVTSTSQSIQTSTVSFTSNSLHSVPQENSVRAVKDACALPQLPATSPSDCTSST
EALYIEEESDGERTLGKIKKAEQKGGWERLERSYQLAGCSDLTADAKAERARVGDVELSH
TSEKMTPLKPISDSVLHGSQADVSKGEQMCSKMDKDEIDKLLLDLECFSQKMESTLREPS
LKESEPACLQVFGWQGRQVLPLALEPKSKPIDPTSPLSKIMETNGHKMEEDDKALLLRIL
ESIEDFAQELVEFQTGKGSLSKEREVMQILQETLTTPSQSLLAGQKSYAGAASRDCVPAS
IQQAPEVIKVQSKQEKKPGTSSPVPLNSAVSPCTLLPVNKATSSTPLSINIPRFYFPKGL
PNVCTNHEEIIARIEEAFTEFEDEKANIYEMGKIAKICGCPLYWKAPMFNALGGERTGGV
SVHSFVSMWRKILRNCHDDASRFTYLVAKPSCDYLEQEDFIPLLQDVVETHPGLTFLKDA
PEFHSRYITTVIQRIFYTVNRSWSGKITLTELRKSNFLQTLALLEEEDDINQITDYFSYE
HFYVIYCKFWELDTDHDLYISQKDLARYSDQALSNRIIERIFSGAVVRGNEVQKEGRMSY
ADFVWLLISEEDKRSATSIEYWFRCMDLDGDGVLSMYELEYFYEEQCERMEVMGIEPLPF
HDLLCQMLDLVKPEREGRVTLRDLKRCRMAHVFYNTFFNLEKYLDNEQRDPFAVQKDIEN
DGPEPSDWDRYAAEEYEILVAEESGNEPLQEGSFEEDYDTDEVLSPPETGDKSDKLVIPD
LSA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattttgaagcctcacttccaagtgtgatctgtgctatggcagcaacctacagg
cttatggtcacttctgtgaactgctacagcagtgtggtgatagaccagcactttcagcac
actgtgcattactgcacagggacttgccaagtgtttaagcaaggagttacatgcatagtt
gcccaccacagtgtctgcgcagagctcagtgtccaagataccaacctagaccataaaatt
cctgttcctgaaaatggacttgccttgactggaaatgaggactatcaccaaatcctccca
aataatccaagagtgaaaaagggctcttcagtgcaagcctccagcagtttaaaagacatt
actggtgaggccataaaccttgccagtggtaaaataaaagaattctcctttgaaaagctc
aaaaactcttccagtcatgtagcctacagaaagggaaggaaagttcggtcagaatcattc
agcagacgatcatttgattttgacttgatttatgggcacttcaacaatgatgagaactgc
cctccgtgtggctttctgcagagtccttcacctgtggagaaatggcaggaaagcaatgat
gctccagaagtcaccatgaatcccatggttcccttctcccctcattccttctctgaagaa
aacttcattacccagattttagaaaaacacaagctagatggttcttcgggtggagatatt
aaggtgtgcttagacatcttgctcaagtgctcagaggatctgaaaaagtgcacagacata
ataaaacattgcatcaaaaagaagtctgcagacagtgttagcggagggaacagcaacgat
cccctggctaattcggaaatgatatatatgaatctgatgacaagattttcttcatacctg
aaaaagctaccctttgagctcaagccaccaggacacaaggaagctagtgacttggcagaa
ctagttaactgttttcatggcttgcagcaaactcccttccccccagtatttggagatgag
cagccacctaggtatgaagatattattcagctgccatcctcaagtgcagttcctctcgga
ctaccgggtgatcagcgtgaggtgacaagcacctctcagtccatccaaacaagcactgtg
agctttacctcaaactcccttcacagcgtcccacaggagaacagcgtgagagctgtgaaa
gacgcttgtgctctacctcagttaccagccacaagcccttctgactgcacgtcttccact
gaggctctgtacattgaggaggagtctgatggggaaagaacattagggaaaataaagaag
gcagagcagaaagggggctgggagaggttagagcgcagctaccagctagctggttgttca
gatctaactgccgatgctaaagcagaacgtgccagggtgggagatgttgagctctcccac
acttctgagaaaatgactcctttaaaaccaatttcagattctgtgttgcatggttcccaa
gctgatgtctccaaaggagaacagatgtgcagtaagatggacaaggatgagatagacaaa
ctgctgctggacttggagtgcttctcacagaaaatggagagtactttgagggaaccctct
ctaaaggagagtgaacctgcctgtttgcaggtgtttggctggcagggtaggcaggtacta
cctctggctcttgaacccaaaagtaaacccattgaccccacttcccctttgtcaaaaatc
atggaaaccaatggtcataaaatggaagaggatgacaaagcccttttactgcgtatcctg
gaaagcattgaggactttgcccaggaactggtggaattccagacaggcaagggaagcttg
tccaaggagagggaagtgatgcagattcttcaggaaactttaacaactccttcacagtcc
ctccttgcagggcaaaaaagctatgctggggctgcctccagagactgtgttccagcttca
attcagcaggccccagaagtgattaaggttcaaagtaaacaagagaagaaacctgggact
tcatccccagtccctttgaactccgcggttagcccttgcactcttctgcctgtgaataaa
gccaccagcagtacccctttgtcgataaacattccacgtttctacttccctaaaggactt
ccgaatgtctgcactaatcatgaagaaatcattgccaggattgaagaagcctttacagag
tttgaagatgagaaagcaaacatctatgaaatggggaaaattgctaagatatgtggctgc
ccactctactggaaagcacctatgttcaatgcattgggaggagaaaggacaggaggtgta
tctgtacactcatttgtatctatgtggagaaaaatcctacgtaactgccatgatgatgca
tccagattcacataccttgtagcgaagcctagctgtgactacctagaacaggaggacttc
attccgctgcttcaggatgtggtggaaacgcatcctggcttgacgttcctgaaggatgct
ccggagttccattcccggtatattacgacggttatacagagaatattctacacagtcaat
cgatcctggtctgggaagatcactctaacagagctgaggaaaagcaacttcttgcaaact
cttgctctcttggaagaggaggatgacataaatcagatcacagattatttctcctacgag
cacttctatgttatatactgtaaattctgggagctggacactgaccatgatctttacatc
agccagaaggatctggctaggtacagtgatcaagctttatcaaacaggattatcgaacga
atattcagcggtgctgtggtgagaggcaatgaagttcaaaaggaaggccgcatgagttat
gccgattttgtgtggctcctgatttcagaggaagacaagaggagtgctacaagcattgag
tactggtttcggtgcatggacctggatggggatggagtgctctccatgtatgaactggag
tacttttatgaggagcagtgtgagcggatggaagtgatgggcatagaaccactgccattt
catgacttgctttgtcagatgcttgatctcgttaagccagagagggaaggaagagtaaca
ctgcgagacctgaagaggtgcagaatggctcatgtattctacaacaccttctttaattta
gagaaatatctggacaatgaacagagggatccctttgcagtgcaaaaggacattgaaaat
gatggccctgaaccctctgactgggacagatatgctgctgaagagtacgaaattcttgtg
gctgaggagtctgggaacgaaccattacaagaaggatcatttgaagaagactatgacaca
gatgaagtcttatctccccctgaaactggagacaagtcagacaaactagttatcccagat
ctctcagcatag
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