Gavia stellata (red-throated loon): 104261864
Help
Entry
104261864 CDS
T08384
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04010
MAPK signaling pathway
gste04210
Apoptosis
gste04218
Cellular senescence
gste04620
Toll-like receptor signaling pathway
gste04621
NOD-like receptor signaling pathway
gste04622
RIG-I-like receptor signaling pathway
gste04623
Cytosolic DNA-sensing pathway
gste04625
C-type lectin receptor signaling pathway
gste04920
Adipocytokine signaling pathway
gste05132
Salmonella infection
gste05164
Influenza A
gste05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104261864 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104261864 (NFKB1)
04218 Cellular senescence
104261864 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104261864 (NFKB1)
04621 NOD-like receptor signaling pathway
104261864 (NFKB1)
04622 RIG-I-like receptor signaling pathway
104261864 (NFKB1)
04623 Cytosolic DNA-sensing pathway
104261864 (NFKB1)
04625 C-type lectin receptor signaling pathway
104261864 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
104261864 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104261864 (NFKB1)
05168 Herpes simplex virus 1 infection
104261864 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
104261864 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104261864 (NFKB1)
Transcription factors [BR:
gste03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104261864 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
TPR_12
Motif
Other DBs
NCBI-GeneID:
104261864
NCBI-ProteinID:
XP_009816360
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAGEDSYIMGVSDPQMFAMDQFMGMNALFNNTNYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGGGGSAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHGLSNSTAEQDGKSSDKQSDKWDMKHDAEVETMERNECRTSGDNEKKEDAA
SSCKTEVNEADCRWQDGLFLEKAMQLAKRHCNALFDYAVTGDVKVLLAVQRHLTVVQDDN
GDNVLHLAIIHFHTELVKNLLEVMPDLNYSDIINMRNDLYQTPLHLAVITKQAEVVEDLL
KAGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHKKISPMVDLSNGEGLSAIHMVVMAN
SMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEHENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDDEDDDEGIVPGTTPLDMAANC
EVYDILNGKPYESAVVSEDLLTQGHLRELNESSKMQLYKLLEAPDPNKNWSTLAQKLGLG
ILNNAFRLSPSPAKTLLDNYEVSGGTVQELIAALRQMDHTEAIEVIQKALSISRSLSHQE
DNTAKALLSSSPPTFANRETGELYNSKSQDNESMCDSGVETSFRKLSFTYSDSLNSKSSV
TLHKMTLGYGHESSVQSNYIAN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagattcctatattatgggagtgtctgatccccaaatgtttgcaatggat
cagttcatgggaatgaatgcattatttaataacacaaattacatcacctcagacttacca
ctacgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagagggggttt
cgtttccgatacgtatgcgaagggccttcacatggtggacttccgggtgcttctagtgaa
aagaacaaaaaatcataccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
atcgtccagttagttactaatgggaaatacgtccacttacatgctcacagcttggtgggt
aaattttgtgaagatggagtatgcacggttaatgcaggacctaaagatatggttgtaggg
tttgcaaatcttggaatacttcacgttacaaagaagaaggtgtttgaaactctagaaacg
cgcatgatagatgcttgcaaaaaaggatacaacccgggactcctggtgcatcctgaactt
ggttatctgcaggcagaaggatgtggagacagacagctgaccgaacgagaaagagaaatt
attcgtcaggcagcagtacagcagactaaagaaatggatctcagtgtggtgcgtcttatg
tttacagcctttctccctgacagtaatggtagtttcacacggaaacttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacttaaaaatcgtaagaatg
gacagaacagcagggtgcgtaacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaatggaggtatgtgggaa
ggctttggagacttttctcctacagatgtacataggcagtttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtcgg
aaatctgatctagaaacaagcgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtacaaaggaaacgacagaagctcatgccaaacttctctgatggctatggt
ggaggcagtggtgcaggaggcggtggcatgtatggagggggaggtggcagtgctggctct
gggttcagttatccttcatacggatactctgcttttggagggatgcatttccaccctggc
acaactaagtccaatgctggaatgaaacatggactatcgaatagcacagctgaacaagat
gggaagagctctgataaacaaagtgacaaatgggacatgaaacatgatgcagaagtggaa
actatggagaggaatgagtgcagaacctctggtgataatgagaagaaagaggatgctgct
tcttcctgcaaaactgaagtaaatgaagcagattgcaggtggcaggatggtctgtttctg
gagaaggccatgcagcttgccaagcgtcactgcaatgctctttttgattatgctgtaact
ggagatgtgaaggtactgttggctgttcagcgccatctcactgttgtccaggatgacaat
ggagacaatgtccttcacttggcaattatccactttcatactgagctggtgaaaaacctc
ttggaagtgatgcctgatttgaattacagtgacataattaacatgagaaacgacctttat
cagacccccttgcacctggcagtaatcacaaagcaggcagaggtggtcgaagacttgctg
aaggctggagcagatgtcagccttctggatcgccatggtaattctgtcttgcatttagct
gctactgaaggagatgacaagattttgagtctactcctcaagcataagaagatatctccg
atggtcgacctttccaatggtgaaggtctcagtgcaattcacatggtggtgatggcaaat
agcatgtcctgcctcaaacagctgattgctgctggagttaatgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttagctgttgaacacgagaacatacctttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacatatgatgggacaactcct
cttcacatagcagctggaaggggctctacaaaattggcagcagttcttaaagcagcaggt
gcaaatcctcacattgagaactttgagccattgtttgatctagacgatgtgaaagatgat
gaagatgacgatgaaggaattgtgcctggaacaacaccactggatatggcagccaactgt
gaggtgtatgacatattaaatggcaaaccctacgagtcagcagtggtttcggaggaccta
ctgacgcaaggacatttgagagagctgaatgaaagttccaagatgcagctttacaaacta
ttggaagcccctgatccaaacaaaaactggtccactctagcacaaaaactgggtcttggc
atacttaataatgccttcaggttgagcccttccccagcgaaaactctgctagataactat
gaggtttctggtggtacagttcaagagttgattgctgctttgagacagatggatcacaca
gaagccattgaagtcattcagaaagcactatccatctcacgaagcctgtctcaccaggag
gacaatacagcaaaagctcttctgtcatcatcaccacccacctttgcaaatagagagaca
ggtgagctttataatagcaaatctcaagacaacgaaagcatgtgtgacagtggtgtggag
acttccttccgcaaactgagctttacttactcagactctctgaacagcaagtcatcagtg
acgcttcacaaaatgaccctgggctatggacatgaaagttcagtgcaaagcaattatata
gccaactag
DBGET
integrated database retrieval system
