Gavia stellata (red-throated loon): 104262087
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Entry
104262087 CDS
T08384
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03420
Nucleotide excision repair
gste04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104262087 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
104262087 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104262087 (DDB1)
03400 DNA repair and recombination proteins [BR:
gste03400
]
104262087 (DDB1)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
104262087 (DDB1)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104262087 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
104262087 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
104262087
NCBI-ProteinID:
XP_009816628
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPMYGKTAVMELFRPKGESKDLLFILTAKYNA
CILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLD
RENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGP
WKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDP
NGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGS
RLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGS
LRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRETDNTLVLSFVGQTRVLMLNGEEVEET
ELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSN
QVVVAVGRALYYLEIRPQELRQISCTEMEHEVACLDITPLGDTNGMSPLCAIGLWTDISA
RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLSDR
KKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDG
YPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDAS
GGTTALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQ
FLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEV
KGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFILVGDL
MRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTD
EERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSES
WYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQ
EVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3347 nt
NT seq
+upstream
nt +downstream
nt
ggcacttcacctcagcggaggatttgaacctgctgatcgccaagaatacgcgactggaaa
tctacgtggtgacagcggaggggctgcggcccatgtacggcaagaccgccgtcatggagc
tcttccgccccaagggggagagcaaggatttgttgttcatcctgacagccaagtataacg
cctgcatcctggagtacaagcagaacggggacagcattgatattataacccgtgcccacg
gcaatgtgcaggatcgcatcggtcgtccctcagagaccggcataattggcatcattgacc
cagagtgccggatgatcggcctgcggctctatgatggcctcttcaaggtcattcccctgg
accgggagaacaaggagttaaaggcttttaacatccgcctggaagagctccaagtcatcg
atgtgaagtttctctacggctgtcaggctccgaccatctgcttcgtctaccaggaccctc
agggtcgccacgtcaagacgtacgaggtgtccctgcgcgagaaggaatttaacaaaggtc
cttggaaacaggagaacgtagaggctgaagcctccatggtcatcgcagtgccagagcctt
ttggaggtgcaatcatcattgggcaggagtctatcacctatcacaacggagataaatatc
tagctatagctccacctatcatcaagcaaagtacgattgtgtgccacaaccgcgtggatc
ccaatggatcccgttacttgctgggggacatggaaggacgcctcttcatgctactcctgg
agaaggaggaacagatggatggcactgtcactctgaaggacctgcgcgtggaactgctcg
gtgagacatccattgcagagtgcttgacctacctggacaacggagttgtgtttgttggtt
ctcggcttggggattcccagcttgtgaagctcaatgtggacagcaacgagcagggctcct
atgtagtggctatggagaccttcaccaacctcggtcctatcgtcgacatgtgtgtggtag
acctggaaagacaaggccaagggcagctggtcacatgctcgggcgcgtttaaagagggtt
cactgcggatcatccggaacggcattgggattcatgagcatgccagcattgatttgccag
ggattaaaggcttgtggcccctgaggtcggactctcatcgtgaaacggacaatacgttgg
tgctgtcctttgttggccagaccagggttcttatgttgaatggagaggaagtagaagaga
cggagctcacggggtttgtggatgatcagcagactttcttctgcggcaatgtggcacatc
agcaattgatccagatcacctctgcctctgtgagactggttagtcaggagcccaaagccc
tggtgagcgagtggaaagagcccaacggaaagaacatcagcgtggcttcttgtaacagca
accaggtagtggtggctgtgggacgagccctgtactacctggagatccgaccccaggagc
tcaggcagatcagctgcacagaaatggagcatgaagttgcctgcctggacatcaccccct
tgggggacactaacggcatgtccccactgtgtgcaatcgggctctggacagacatctctg
cccgcatcctaaagctgccttcgtttgaactgctgcacaaagagatgctgggaggagaaa
ttatccctcgctccatcctgatgacgaccttcgagagcagccattaccttctgtgtgccc
tgggggatggagctctcttctacttcgggctcagcctcgagacaggcttgctgagtgacc
ggaagaaggtgacccttgggacccagcccactgtcctgaggactttccgttccctgtcca
ccaccaatgtctttgcctgctctgaccgccccaccgtcatctacagcagtaaccacaagc
tggtcttctccaacgtcaacctgaaggaggtgaactacatgtgtcccctcaactcagacg
ggtatcccgacagcttggcgttggccaataacagcaccctgacaatcggcaccattgatg
agatccagaagctgcacatccgcacggttcccctctatgaatcgcccaggaagatctgct
accaagaggtatcgcagtgttttggcgtgctctcgagccgtatcgaggtgcaggatgcca
gtgggggcaccactgcgctcagacccagcgccagcacccaggccctgtccagcagcgtga
gcaccagcaagctgttctccagcagcacagcaccgcatgagacgtcctttggagaggagg
tggaggtgcacaacctgctcatcatagatcagcacaccttcgaagtgcttcatgctcacc
agtttctgcaaaacgagtacgccctcagcctggtctcctgcaagcttggcaaggatccaa
acacctacttcatcgtgggcaccgccatggtatatcccgaggaggcagagcccaaacagg
gccgtatcgttgtcttccactactctgacgggaagctgcagagcctggctgagaaggagg
tcaagggggctgtgtattccatggtggagttcaatgggaagctgttagccagcatcaaca
gcacggtgcgcctgtatgagtggacagcagagaaagagctgcgcacagagtgcaaccatt
acaacaacatcatggcgctctacctgaagaccaagggagacttcatccttgtgggagatc
tgatgcggtctgtcctcctccttgcgtacaagcccatggaaggaaacttcgaggagattg
ctcgggacttcaatccaaactggatgagtgccgtggagatcctggacgacgacaacttct
tgggagccgagaatgctttcaatttgtttgtgtgccagaaggacagtgcggccacgaccg
atgaggagcgccagcacttgcaggaggtggggctgtcccacctgggagagttcgtcaatg
tcttctgccatgggtctctggtcatgcagaacctgggtgagacgtccacaccaacgcagg
gctcggttctcttcggcacagtcaacggcatgattggactggtgacctcgctgtcggaga
gctggtacaacctcctcctggacatgcagaacaggctgaataaagtcatcaagagcgtgg
gcaagattgagcactccttctggagatcgtttcacaccgaacgcaagacagaaccggcta
ccggcttcattgacggtgacctgattgaaagcttcctggacatcagcaggcccaagatgc
aggaggtggtggcaaacttgcagattgacgatggcagcggcatgaagagggaggccactg
tagacgacctgataaagatcgtggaggagctgacccggatccattag
DBGET
integrated database retrieval system
