Gavia stellata (red-throated loon): 104262398
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Entry
104262398 CDS
T08384
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gste03400
]
104262398 (PARPBP)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104262398 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
104262398 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
104262398
NCBI-ProteinID:
XP_009817061
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MIVFQQKILNLIKCFRRQWPLFSNSERTTVCGADCMLMVLQLSMAEVNKQHHGDFTVSLS
DVLETWKYFLHDKLGLSYENMKEPENYADLKKAYHAFLARSNMLDLIDICQKCYGLGLVS
EDESIAPVQLLEFISGIMNVKENNGSVLCTPSTLVNRQGQDNVKVTILAKKCVSSYLSLL
VNSKDDLALAHILNAPDRGLSREAFTNLKHASQERKMSIFLMATSFIRTVELGGRGCSSS
LFDPLRVHVKGLSNFVNFIDKLQEIVGEILNPRIAGGRILSTVKMHLIKGRSNGDPFCQA
VEEVVEDLDLKIKNIIDSQHEVLTANTTGVSPARPKLHSINHGTVYCGRDTVKVLLVLLD
EEAVDPPTQNKAELLYDDESLNLFGITSVLTLFRSPAQSNGSPKPLRQRIHKSMDEKKIK
MQQSSIKSQFACTYKNELTEIKDQHFLSSSQVPTSIYPAPKQHLKARYLTEGMNPCRDVP
VLGTLSENVHQTRSYTEMGKLSCEPSKNSKNEQMDLNNDKAIYDKESESSLQKNAKRPKT
SNNPQKDLDSKIGGKRKHSKAASKNKLIAGQAKLTHFFKL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgattgttttccagcaaaaaattttaaacttgatcaagtgtttcagaagacaatggcct
ttattttcaaactctgaaaggactactgtgtgtggagcagactgcatgctgatggtgtta
caactgtcaatggctgaagtcaataagcagcaccatggagatttcacagtatcacttagt
gatgtgttggaaacttggaaatattttttacatgacaaactgggattatcatacgaaaac
atgaaagaacctgaaaattatgctgacctaaaaaaagcctatcatgcctttttagcaaga
agcaatatgttagatctaatagacatatgtcagaagtgctatggtcttggacttgtatct
gaagatgaaagcatagcccctgttcaactgttggagtttatttctggcataatgaatgta
aaagaaaataatggttctgttctttgtactccttctacactagtcaacagacagggccag
gacaatgtgaaggtgacaatcctggcaaagaagtgtgtttcttcttatttaagcctgttg
gtgaattctaaggatgatctggcattggctcatattctaaatgctcctgacagaggactt
agtagagaagccttcactaacctaaaacatgcctcacaggagagaaaaatgtccattttc
ctgatggcaacatcttttatccgaaccgtagaacttggaggaagagggtgttcatcttca
ttatttgatcctttaagagtccatgtaaaagggctttcaaactttgttaattttattgac
aagctgcaagaaattgttggtgaaatcttaaatccaagaatcgcaggggggcgaattctg
tcaacagtgaagatgcatttgataaaaggccgaagcaatggggatcctttctgtcaggca
gtagaggaagttgtagaagacttggatttgaagattaaaaatattatcgattcacaacat
gaagtcttgactgctaatactactggagtcagtccagcacggccaaaattgcattccata
aatcatggcactgtgtattgtggcagagatactgtaaaggtcttactagttcttctggat
gaagaagctgttgatcctcctacccagaacaaagcagaactattatatgatgatgaaagc
ttaaatttgtttggaatcacctctgttttgacactcttcagatctccagcacaatccaat
ggatctccaaaacctcttagacaacgtattcacaaatctatggatgaaaaaaaaattaag
atgcagcaatcttcaatcaaatctcagtttgcatgtacttataaaaatgagttgactgaa
ataaaggatcagcatttcctcagcagtagccaagttccaacctccatatatcctgcacca
aagcaacatttaaaagccagatatctcacagaaggtatgaatccatgtcgtgatgtacca
gtgcttggaactctttctgagaatgttcaccagactagaagctacacagaaatgggaaag
ctaagttgtgagccaagcaagaactccaagaatgaacagatggatttgaataacgataaa
gcaatctatgataaggaaagtgaatcatctttgcaaaaaaatgctaaaagacctaagact
tcaaacaaccctcagaaggacttggacagcaaaatcggtggaaaaagaaaacacagtaaa
gctgcaagcaagaataagttgattgctggtcaggcaaaattaactcacttttttaaacta
tag
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