Gavia stellata (red-throated loon): 104262456
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Entry
104262456 CDS
T08384
Symbol
NRDE2
Name
(RefSeq) LOW QUALITY PROTEIN: protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104262456 (NRDE2)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104262456 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
Motif
Other DBs
NCBI-GeneID:
104262456
NCBI-ProteinID:
XP_009817126
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MARTGVLCARHVAAGLNKVVILNEDGGSRXTREELDWLSNPSFSTEDALLLHQRTAEVTN
LIPEKSPLIRTTSRSELSGESDTDKSLKQSSKKRKKKKKKHHHYKKTKKKTKGDSSSSES
DLDTKHIKDKATRSGRNHKEAAAANLDKKTSNLTSNRFVWLDDIEAFTAETFRIDKKPDP
ANWAYKSLYRGDIARYKRRGQSCLGIDAKKQCITWDSSASERKPLQRRPDRYFTKNNVKV
LNTDGIPVCNRSSPSDPTAFIPVFQMETDEPSDTTEVNPLGIYDPSTTVWLQGEECKSAD
HEPVNRQQTIQEPGINVNSILMTKVEEHNKKVRENPRDINAWMEFVSFQDELMRGPSPYA
SKGEQEVRRKSLKLILEKKLAILERAIESNPSNVDLKLARLKLCTEFWEPPALIKEWQKL
IFLHPNNPELWRKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAVQDGSMVSHPLLPGTEA
AMLAIFIQQCHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGE
PRIGEKGARGWKAWMHQQEKGGWIALKPDDDDEEEIDEDQEIKDKTLPKWHIWLDIEYSR
EARHWLPWRPDKTKKENEEDCEDPERQVLFDDLGPSLIQLSNPDLQRQLLYSFLEFLGVP
CTSKLFPPNLYIAMDENNIFDSVLSDEKPLTSVDFPLSGFSSIGHMDTMLRGRHHIGHYK
EGEEFIQNVFHVLFLLFSGKEKSKLSICWLQYEISKVVQCLQAKNKKKLKAQGRKSKKLA
KNLLKAPDNRNHLSLWKLYAYLEWLLGNIDDARKVFDTALCTAGTGGLKSTQLCSLSLLY
AQLEVELLESIEGAVMSRAVHILTKLAESGPYVPYSGQVLSVNILKARKTYEHALQDHLS
KTPVSDQDQVSDANQLVNLVGCYALFQYLTVGIDAAVLIYAQTSEKLEAPGPQKCENTGE
DFGIQNFPTALEAVTLLHANLLRFHMKISVYPLNPLREALTEALKRYPSNQSLWRSYIHI
QRKSHSASKARRFFDGVTRSTNSLEPWLAAIQAEQMRKKLTENVQRADVGEIHSTIPETG
LTNRIVALFEHAVQSENGTHCPLLWRMYLNFLASLGKKEKSKGLFYKALQNCPWAKVLYM
DAVEYFPDDLQETLDLMTEKELRVRVPMEELDLLLEV
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcacaggcgtactctgcgcaaggcatgtcgcagccggtttgaataaagttgtc
atacttaacgaagatggaggttcaagatgaaccagggaagaattggactggcttagtaac
ccaagcttctctacggaagatgcactgttactgcatcagcgcactgcagaagttacaaat
ctcatccctgaaaaatcaccactaataaggactacttcaagatcagagttatcaggggaa
agtgatacagataagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaaaaaaaag
catcatcactataagaagacaaaaaagaaaaccaaaggggactccagtagcagtgaatct
gacctggacactaagcacatcaaggacaaagccacaagaagtggcagaaatcacaaagaa
gcagcagcagcaaatctagataagaaaacatcaaatcttaccagcaatcgctttgtttgg
cttgatgatattgaggctttcacagcagaaaccttcagaatagacaagaaaccagaccct
gcaaactgggcctacaaatccctgtatcgaggagacatagcaagatacaaaaggagagga
cagtcctgtcttggcatagatgcaaagaaacagtgtataacttgggacagttctgcatca
gaaaggaagccattacagaggcgacctgaccgctacttcacaaagaacaatgtgaaggtg
ctgaacacagatgggattcctgtttgcaatagaagttctccatctgacccaacggctttt
ataccagttttccaaatggaaactgatgaaccttcggacacaacggaggtaaatcctctt
gggatttatgatccatcaactacagtgtggctacaaggagaagagtgcaagagtgcagac
catgagcctgtaaataggcagcaaacaattcaagagcctgggataaatgttaactccatt
ctaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccaagagatattaat
gcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttatgcc
agtaaaggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactg
gctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaactcgccagg
ctgaagctttgcacggaattctgggaaccaccagctttgattaaagaatggcagaagcta
attttcttacatcccaataatccggagctgtggaggaaatatctcctgttctgtcaaagt
cagttcactaccttttctgtttcaaagatcaatagtctctatggaaaatgtttgactaca
ttggcagctgtacaggatggcagcatggtatcacatcctttactgcctggcacagaagca
gctatgctagctatatttattcagcagtgccactttctgaggcaggctggccattctgag
aaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgta
aaagatctgccaacaaggggacaggtggagttctttgaacccttttgggatagtggagaa
ccacgaattggagaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaag
ggtggctggattgctcttaagcctgatgatgatgatgaagaagagatagatgaggatcaa
gaaataaaggataaaactctccccaagtggcatatttggttggatattgaatattctcgt
gaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaaatgaagaagat
tgtgaagatccagaaagacaggtattatttgatgatcttggaccatctttaatccagctt
tctaatccagatcttcaacgtcaactactgtattcatttttggaattcctgggagttcca
tgtacaagtaaactctttcctcccaacctctatattgccatggatgaaaataacatcttt
gacagtgtgctttctgatgagaaaccactgacttctgttgattttccactttctggattc
agtagtattggtcatatggacacgatgctacgagggagacatcacataggccactataaa
gaaggagaggagttcatacagaatgtttttcatgttctattcctgctattttcaggaaag
gaaaaatctaaactgtccatttgttggttacagtatgaaatatctaaggtagttcagtgt
ctccaagcaaaaaacaagaagaagctgaaagcacaagggaggaagagtaaaaagttggcc
aagaatctccttaaagcacctgacaaccgaaaccacctttctctctggaaactgtatgcc
tacctagaatggctgcttggtaacattgatgatgccaggaaggtatttgacacagctctt
tgcacggcagggacaggaggattgaagagtacccagctctgcagcctcagtctgctttat
gctcagctggaagtggaactactagaaagtatagaaggagctgttatgtcacgtgctgtt
catatattgaccaaattggctgaaagtggaccatatgtgccctatagtgggcaagtgtta
tctgtgaatatcttgaaagctcgtaaaacatatgagcatgcactgcaagatcatttaagt
aaaacaccagtttctgatcaggatcaggtcagtgatgctaatcagctggttaacttggtt
ggttgttatgcactgttccagtatttgactgttgggattgatgctgcagtattaatatat
gcacagacttcggaaaaacttgaagctcctggtccacagaaatgtgaaaatactggagag
gattttggcattcaaaattttcccactgctcttgaagctgtcacactgctgcatgcaaat
ttactcagattccacatgaaaattagtgtttatcctttgaatcctctgcgagaggcacta
acggaggctctgaaacggtatcctagcaaccagtctctttggaggtcatatatccacatc
caaaggaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtct
actaactctttagagccatggctggctgcaatccaagcagagcagatgagaaaaaaactc
actgagaatgtccagagggcagatgttggtgaaatacattctactattcctgaaactggg
ttaacaaatcggattgtggctctatttgaacatgcagttcagagtgaaaatggtacccat
tgtccactgctgtggagaatgtatttgaactttctggcttcactaggaaaaaaagaaaaa
agtaaaggattgttttataaagcccttcaaaactgtccctgggcaaaggtactctatatg
gatgcagtagagtacttccctgatgatctgcaagaaacgctcgatctaatgactgaaaaa
gaattgagagtgcgggtacctatggaagagctggatctactattagaggtttaa
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integrated database retrieval system
