Gavia stellata (red-throated loon): 104262575
Help
Entry
104262575 CDS
T08384
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104262575 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gste01009
]
104262575 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gste04515
]
104262575 (PCDH9)
Protein phosphatases and associated proteins [BR:
gste01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104262575 (PCDH9)
Cell adhesion molecules [BR:
gste04515
]
Cadherins
Protocadherins
104262575 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
MAP17
Big_9
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
104262575
NCBI-ProteinID:
XP_009817284
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAXAELKYTIVSGNNKGLFR
IDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDL
IRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHASRFKAA
QRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLP
AELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKKHHVIQEL
PLDNTFVGGCDTLSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWSISTAYKCPINQ
Y
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggacctaagggatttttacctgttggctgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgagaatgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacgggaaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
accactggggaaatctttacaacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaattattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcggcaacagatcctgacacaggtttcaacggcgtgcagcactacgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgatcgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaataaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccggtgtttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatattttcggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacgccggct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggccgtttacgacaaccagtatttg
ttagagacctcttccttattggactatgaggggaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttctgactgcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttactcataatcacttccagtttttc
gtatcagagaacttaccaaagtatagcacggtgggggtgatcacggtgaccgatgcggat
gctggggaaaataaagcggtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccgtactctggagttataaagtccaatgtctcttttgatcgagaacagcagagctcc
tacacctttgatgttaaggcagtggatggagggcagcctcctcgctcttctacagcaaaa
gtaaccataaatgtcatggatgttaatgataacagccctgttgtcatctacccaccttct
aatacttcttttaagctagtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctngtgccgagcttaagtacacaattgtaagtggaaataacaagggtttgtttcgg
attgatccggtgacaggtaatatcacgctggaagaaaaaccaactcctaatgatgtgggg
ctgcatcgcttggttgtcaacatcagtgatttgggttatcccaaatccctgcatactctt
gtgcttgtttttttgtatgtaaatgatactgctggaaatgcctcttacatttatgacttg
atacgcaggactatggaaacgcctttggaccggaacataggggacagtagccaaccctac
caaaatgaggactatctcacgatcatgattgccattgtggcaggcgccatggttgtcata
gtggtgatatttgtcacggttcttgttcgctgtcgacatgcatctagattcaaagctgcc
cagaggagcaagcaaggtgctgagtggatgtctcccaatcaggagaacaagcaaaacaag
aaaaagaaaaggaagaaaaggaaatctccgaagagctctcttttgaactttgtgaccatt
gaggagtccaaacctgatgatgcagttcatgaacctatcaacgggacaataagccttcca
gcggagctggaggagcaaagtataggaagatttgattggggcacagcaccaccaacaacc
tttaagcctaacagtcctgatcttgccaagcattacaaatctgcctctccgcagtctgct
tttcatctcaaacctgacactccagtttcagtgaaaaagcaccacgtgattcaggaactc
ccgttggacaacacctttgttggtggttgtgacaccctttccactagttcagatcacttc
agtgcctcagagtgcagttcccagggaggcttcaagacaaagggccccttacacaccaga
caggtaaacgagcacttttactggtctataagtactgcatacaagtgcccgatcaaccag
tattaa
DBGET
integrated database retrieval system
