Gavia stellata (red-throated loon): 104262690
Help
Entry
104262690 CDS
T08384
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gste03016
]
104262690 (TRUB1)
Enzymes [BR:
gste01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104262690 (TRUB1)
Transfer RNA biogenesis [BR:
gste03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104262690 (TRUB1)
Prokaryotic type
104262690 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104262690
NCBI-ProteinID:
XP_009817430
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
AGVQTNGNKRNQVLKIGHGGTLDSAASGVLVVGIGKGTKMLRTMLAGSKKYTAIGLLGKA
TDTLDATGKVTEEKPYDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGE
AVEAKPARPVTVYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRT
KHGPFTLEEHALYEDKWTIDEIARSLEHCTSLLPGEPSHKKLKTEHPGETAVSCEDK
NT seq
716 nt
NT seq
+upstream
nt +downstream
nt
aagctggtgtgcaaacaaacgggaacaaaagaaatcaggttttgaaaattggacatggtg
gaactttggacagtgcagcatcaggagttctggtggttggtattggaaaaggaacaaaaa
tgctgagaactatgttggcgggttccaagaagtatactgccattggactactgggcaaag
ctactgatacattagatgctacaggaaaagtaactgaagaaaaaccttatgaccagataa
caaaaggagatcttgaaaatgtgctgcaaaagttcacaggggacataatgcaggttcctc
cactctattctgctttgaagaaggatggagaaaggctatcaactctgatgaagagaggag
aagcagttgaagcaaagcctgctcggccagtaacagtgtacagcctctctctccaacagt
tccagccaccactgttcacactggatgttgaatgtggtggtggcttttatgtcaggagcc
tggtcagtgacattggcaaagaactgtctacctgtgccactatgcaagagctgacccgaa
ccaaacatgggccatttacgctggaggagcatgccctttatgaagacaaatggacaattg
atgaaattgcacgatccttagagcattgcacgtctcttctcccgggagagccatctcata
aaaaattgaagacagagcatcctggtgaaactgctgtgagctgtgaagataagtga
DBGET
integrated database retrieval system
