Gavia stellata (red-throated loon): 104262906
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Entry
104262906 CDS
T08384
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104262906 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104262906 (DHX36)
03012 Translation factors [BR:
gste03012
]
104262906 (DHX36)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104262906 (DHX36)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104262906 (DHX36)
Translation factors [BR:
gste03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104262906 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
Sir1
PhoH
Motif
Other DBs
NCBI-GeneID:
104262906
NCBI-ProteinID:
XP_009817722
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDERREEQIVQLLNTVQTKNEKEQEAMSWWSGDEEGPTPEQPAKVKPDAEKAPVRQRPVL
EKTFLDRDMEYLFEKNEQDTDLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVN
LINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAA
ERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSVSHVVLDEIHE
RNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLL
EDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPEKEEKEEIYRERWPDYLRQLRGRYSAST
IDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR
FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD
TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE
LCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPV
EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLT
VVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVNSRDPKD
PKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEE
TEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQS
PARIAHLVKNLRQELDDLLQEKIENPHPVDWNDIKSRDTAVLTAIIDLITTQENESARNY
APRFQSERYS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcagggaagagcagattgtgcagctgttgaataccgtccaaactaaaaat
gaaaaggagcaagaagccatgtcctggtggtctggggatgaagaaggacctactccagaa
cagcctgcaaaagtgaaaccagatgctgaaaaagctcctgtaagacagagaccagtcttg
gaaaaaacgtttctcgatagggacatggaatatctctttgaaaaaaatgagcaggatact
gatttagatgagcagcttaaagaagacttaagaaagaagaaatctgatcctagatatatt
gaaatgcagagattccgagagaaactcccttcatatgggatgagacaggaacttgtaaac
cttataaacaataatcgagtaactgtgataagtggtgaaactggttgtggaaagacaacc
caagttacgcagttcatcttggatgattacatagagcgagggaaagggtctacatgcagg
attgtttgtacgcagcctaggaggatcagtgctatctcagtggctgagagagttgctgct
gaaagggcagaagcatgtggtaatggcaagagtacaggataccaaatccgtctacagagt
cggttaccaaggaaacaaggttcaattttatactgtaccacaggaattgtcctacagtgg
ctccagtcagataagcacttgtccagtgttagtcatgtagtccttgatgaaattcatgaa
agaaatcttcagtcagatgttttaatgagcattattaaagatcttttgaatattcgtttg
gatctgaaagtaatactaatgagtgctactttaaatgcagagaagttttcagagtatttt
gataattgtccaatgattcacatacctgggttcactttccctgtggtggaatatctgctc
gaagatgtaattgagaagctgaggtatactccagaaaacacagatcgacggccgcggtgg
aagaaaggcttcatgcaaggccacgtgagcagaccagaaaaagaagaaaaagaggaaatc
tacagggaacgatggccagactacttaaggcagctgcggggcaggtattcagcaagtact
attgatgccttggaaatgatggatgatgacaaggttgaccttgaccttatagcagcactt
atcagacacatcgttttggaagaagaggatggtgcaattctagtgtttcttccaggctgg
gacaacattagcactttgcatgatctcttgatgtcacaagtcatgtttaagtcagatagg
tttattatcatacctttacattcattgatgcctactgttaaccagactcaggtttttaag
aagaccccgccaggagtaaggaaaatcgtgattgctaccaacattgcagagactagcatt
acaatagatgacgtcgtgttcgttatagatggtggaaaaataaaggaaactcactttgac
acgcagaacaacattagcacaatggcagcagagtgggttagtaaagctaatgccaagcag
aggaaaggtcgagcaggaagagttcagccaggccactgttatcatctatacaatggacta
cgtgctagccttctagatgattatcagttaccagagatcttgaggacacctttggaagaa
ctctgtttacaaatcaagattctaaagcttggtggaattgcttattttctgagcaaatta
atggatccaccctctcgtgatgctgtaatgttggccataaatcatctaatggagctgaat
gctttggacagacaagaagaactgactccactaggtgtccatttagcacgattaccagtt
gaaccacatattggaaaaatgatcctctttggagctttattctgctgcttggatccagta
cttacaattgcagctagcctcagcttcaaagacccttttgtcattcctctgggcaaagag
aaagtagcagatgcaagaagaaaggaactgtcaaagaacactaaaagtgatcatctaact
gtggtgaatgctttcacgggctgggaagagactcggcgtcgtggtttcagaactgagaaa
gactattgctgggaatatttcctgtcttcaaatacactccagatgctgcataacatgaaa
ggacagtttgcggagcatctccttgcagctggatttgtgaatagtagagaccccaaggat
cctaaatctaataccaactcagataatgagaagttgctcaaagccgtcatctgtgctggt
ttatatccaaaagttgcaaagatcaggccaagcttcagcaaaaagagaaaaatggtgaaa
gtttgcaccaagacagatggaacagttaatattcatcctaaatcggttaatgtggaagaa
acagagttccattataactggcttgtgtaccatttgaagatgagaactagcagtatttac
ttgtatgattgtacagaggtttctccatactgtctcttgttctttggaggagatatatcc
attcagaaggataaagatcaggataccatcgctgtggatgaatggattgttttccagtct
ccagcaagaatagcgcacttagttaagaatttaagacaagagcttgatgatcttctacaa
gaaaaaatagaaaacccacatcccgtggactggaatgatattaaatccagggatacagca
gtactgacagctattatagacttaatcacaacacaggagaatgaaagtgccagaaactat
gctccacgattccagagtgaacgctatagttga
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