Gavia stellata (red-throated loon): 104263167
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Entry
104263167 CDS
T08384
Symbol
HELZ
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104263167 (HELZ)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104263167 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104263167 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104263167
NCBI-ProteinID:
XP_009818078
LinkDB
All DBs
Position
Unknown
AA seq
1943 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTAQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHQDKEQHEQSRNGKSENTAGPEISKIRTPEKKPGESKQVDLEANSQNRSPES
RSSVGYPNAKFHRKDNLNPRQLNLHLTPPHSQYAVPNRHFQHVSQIPRQPYPLQQQQNLL
SQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEQHPPPMLQEVNNPLRPIAQHNPVLPTHLNXXXXXXXXXXXMPLGDTLDRM
HGNVALETIRQQQQARLQQWSEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRA
NWKLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPA
LPSPSCNSNHSGHFPNFTENNRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSPLKYLQ
PDGSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAIGQEPFHPLTSRAVS
ASSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNY
SSPELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSNSFNYS
VLQHLGQFPPLMPNKQIVESNSSSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDP
LSLFQELSLGSSSGSNGFYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgtatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagttccgccctccacccaggggagtcacaagcagtgaagaatat
acgctatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcagtaactgtcaccaccaaaaagtctcatcagacatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactgcccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaatgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaaca
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctatctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacat
gacctcctttatatagaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtggcaagtttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactttttggccgctttaagctcactgaaacgctttcggaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtatccagggaatgctgcgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgctaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagat
attcttaagcagcgagtagtagttgttactttaaatacatcacagtatctatgtcaactg
gatcttgaaccaggtttttttacacacattctgttagatgaagctgcgcaagctatggag
tgtgaaactattatgcctctagcattagctaataaaaacacaagaattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaaccttcat
gtttcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaacttttctat
gaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttgact
ttcttcacagcacgtggagaagatgtgcaggaaaaaaatagtacagccttttacaataat
gcagaggtgtttgaagtagtagagcgtgttgaagaattaagaagaaaatggcctgttgcc
tggggcaaattggatgatggcagtataggtgtcgtaacaccttatgctgatcaagtgttc
agaattcgggctgaacttcggaaaaaaagactgtctgatgtcagtgtagagagagtgcta
aatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacggcataca
tgcaaacataagcaaacaccaattaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatggttttctgtctaattacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggaaaggtttattgccctatgtcatgagaatgaaagtctccacggtatcaca
tttgaacagatcaaagctcagttggaagctttggagttaaagaaaacttatgtgttgaac
ccattggctcctgagtttatcccccgagctcttcggcatcaacattcagcgaataccacc
aaacaacagcagtcaccaccaaagggcaaggtccatcatcataaccagaatgaccatttc
ccacctgatggaatcgttcagcccaatccttctgttctaatcggaaatcctatccgagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtaggttt
gcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctgtta
caggcacatgggcgtgggtctcctataccttatggcctgggacatcattcaccggttagc
ataggacaacagcagcagcttcagcatcaagacaaggagcaacatgaacaaagtcgaaac
ggtaaaagtgaaaacactgctggacctgaaatcagtaaaattcgaacacctgagaagaaa
cctggggaatccaagcaggttgacttagaagcaaattctcagaatagaagcccagagtca
cgttccagtgttggttatcctaatgctaaatttcatcgcaaagataatcttaaccccagg
cagctgaatctacatctcaccccaccccactcacagtatgcagttccaaatcgccacttc
cagcatgtgtcacagataccaaggcagccatatcctctgcaacagcagcaaaacctttta
agtcaacaacaaaatcatttgcctgaacaacaaaaccaaatgccaccccagcaaagccag
gtagttcagcagcataatcatttgaatcagcagcctccacaaccttcgcagctttcccct
gcttaccaggcaggccccagccaatctttttttaataatccaattccccaccgaccacat
tctcctgctgtagatgctgtgatttcagaacaacaccccccacctatgttacaagaagtc
aataatcctttgaggcctattgcacagcacaaccctgttctgccaacccacttgaacaan
nnnnnnnnnnnnnnnnnnnnnnnnnnnngaatgcccttaggggacactttagatcgtatg
catggaaatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatgg
agtgaacataatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcct
catctaccacatcttcctcagcaaccaattggattgcatcaacagcagcaagttagggca
aactggaaacttgccagtaatacagaagatgaaacagaggcaacatattcaagattccag
gatttgctcagagaactgtcacaccgtgatcaaagtgaaagtcgggacttagctgaaatg
ccaccgcctcagtcaagactgttgcaatacagacaagttcagcccagaagcccaccagca
ctcccttctccctcctgcaactctaaccacagtggtcactttcctaacttcactgaaaac
aacagagacattgaaatacccagtaacccagcatttcagcagcatttaccccaaatatac
aatccccctttctcaatgccatctgaacatataaccccgtctcccttgaaatacctgcag
cctgatggatcgtggacttatgctaacctacagcagaatcaccttatggggcagggcttt
cattatggtatacctccattgccccataggtcacaacaaaacccttttatacaaatacag
aatcatcagcatgcaatcggtcaggagccatttcatccactcacatctcgagcagtatct
gcttcttcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccattgtac
caaagaagaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaa
gacagtcttggtcagtgtaaagagcttcaggaccacagtaaccagtcatctttcaactat
tcatcacctgagttgtgggtaaactcctcctcatctgccccatacccaaacattccatgc
aatggagccaacagagcagttccaccccgggagttgttagctccaccgaagacggtcaag
cccccagaggaacacttgaaggccgaaaacatacagctatccaattccttcaactacagc
gtgctacagcatctcggccagttcccacctctcatgcccaacaagcagatcgtcgagtcg
aacagcagcagccagcagaacgctggtgggagcaagcctgtcatgtcctacgcaagtgct
ctgcgggccccaccaaagcccaaacctcctcctgagcagacaaaaaagaatagcgaccct
ttgtctttatttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcc
tattttaaataa
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integrated database retrieval system
