Gavia stellata (red-throated loon): 104263181
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Entry
104263181 CDS
T08384
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104263181 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104263181 (NUP54)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104263181 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104263181
NCBI-ProteinID:
XP_009818093
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MPVVSVVMEKYFSFSFXEPAFYLELMLPCSLSASRLSGFGGLETTNSTASGFNFGGFGLT
ANPAVNFNIGNFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTAGPAFSFSAPTNTGTSG
LFGATQNKGFGFGTSFGTGTGTGLGSGLGTGLGFGGFGTQQQQTSKRTTLGSGLFSQPAQ
TPAQSNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENP
FCRFKAVGYSLMPNNKDEDGLVVLVFNRKEVDIRSQQQQLVESLHKILGGNQTLTVNVEG
VKTMPDDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELS
PAQVKQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQT
RLDIISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQ
LRVQLDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQ
QQEGLSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgtgtccgtggtgatggaaaaatattttagcttttctttcnccgaacctgcc
ttttacttagaactaatgttaccttgctctctttctgcttcccgcttgtcaggatttggt
gggcttgaaactacaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcctgcagtgaattttaatattgggaatttcggtgtttccactacctcaactcca
ccattcaattttggtaacagtctggcaagtgcaggtgcgtttggaggatttgggacaact
accaccactgcaggaccagcatttagtttttctgctcccaccaatacaggcaccagcgga
ctctttggtgctacccagaacaaaggctttggatttggtactagttttggcacaggaact
ggaactggcttgggtagtgggttgggaactgggctaggctttggaggcttcggtacccag
cagcaacagaccagtaagcgcacaacattaggaagcggcttgttcagccagcctgctcag
acacctgcccagtcgaaccagctcatcaatacagccagtgccctctcggctccgacactc
ttaggagatgagagagatgctatcttggcaaaatggaaccagcttcaggccttctgggga
acaggcaaagggtacttcaacaataacattgctccggtggagttcacgcaggaaaacccc
ttttgcaggtttaaggctgtgggttacagtttaatgcccaacaacaaagatgaagatggc
ctcgtggtcttggtctttaacagaaaggaagtagatattcgaagccagcagcagcagctt
gtagaatcactacacaaaattctgggaggaaaccagaccctcactgtcaacgtagaaggt
gttaaaacgatgccagatgaccagacagaagtgatcatctacgttgttgagcgctcgccc
aatggcacttcccggagagttcccgcaacgaccctctacgcccactttgaacaagccaac
ataaaatcatccctgcagcagctgggggtcagcctctccatggccagaacggagctctcc
ccggcacaagtcaaacagctcctgcagaaccctcctgccggtgttgatcctattatatgg
gaacaagccaaagttgataatcctgatcctgacaagcttattcctgtgccaatggtgggt
ttcaaggaactgttgagaagattgaaggtccaagatcagatgaccaaacagcatcaaact
cgattagatataatatcagaagatatcagtgagctgcagaaaaaccaaacgacaactatg
gcaaaaattgcacagtacaaaaggaaactgatggcgctttctcacagaacgttacaggtg
ttaataaagcaggagatccaaaggaaaagtggttatgccattcaagcagatgaagagcag
cttcgtgtacagttagatacaattcagtgtgaacttaacgcacctacgcagttcaagggc
agactcaatgagctcatgtcccaaatcaggatgcaaaaccactttggagcagtgcgggct
gaagagcgctattacatagatgcagacctcttaagggaaatcaagcaacatctgaagcag
cagcaagaaggcctgagtcacctaattagcattataaaggatgatttagaggacatcaaa
cttatagaacacgggctgaacgagagcattcccatcagaggaggagtcttcagttga
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