KEGG   Gavia stellata (red-throated loon): 104263513
Entry
104263513         CDS       T08384                                 
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03022  Basal transcription factors
gste03420  Nucleotide excision repair
gste04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104263513 (CDK7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104263513 (CDK7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:gste01001]
    104263513 (CDK7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gste03021]
    104263513 (CDK7)
   03019 Messenger RNA biogenesis [BR:gste03019]
    104263513 (CDK7)
   03400 DNA repair and recombination proteins [BR:gste03400]
    104263513 (CDK7)
Enzymes [BR:gste01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     104263513 (CDK7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     104263513 (CDK7)
Protein kinases [BR:gste01001]
 Serine/threonine kinases: CMGC group
  CDK family
   104263513 (CDK7)
Transcription machinery [BR:gste03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104263513 (CDK7)
Messenger RNA biogenesis [BR:gste03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     104263513 (CDK7)
DNA repair and recombination proteins [BR:gste03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104263513 (CDK7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like Seadorna_VP7 ABC1 APH Pkinase_fungal FTA2 RIO1
Other DBs
NCBI-GeneID: 104263513
NCBI-ProteinID: XP_009818531
LinkDB
Position
Unknown
AA seq 303 aa
IKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVII
KDTSIVLTQSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF
GSPNRVYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL
TRIFETLGTPTEEQWPGMTSLPDYVTFKSFPGMPLQHIFSAAGDDLLNLLQGLFTFNPCT
RVTATQALKQKYFSNRPGPTPGNQLPRPNCPAEAVKEQQNALLNLKRKRTEGIDQGLPKK
LIF
NT seq 912 nt   +upstreamnt  +downstreamnt
attaaactgggacatagatcagaagctaaagatggaatcaacagaacagcccttagggag
ataaaactgttacaggagctaagccatccgaatattattggtcttctagatgcatttgga
cacaagtccaatattagtttggtgtttgattttatggaaacagatctagaggttattata
aaggatactagtattgtgttgacacaatctcacatcaaggcatatatgctgatgacactt
caaggattagaatatttacatcagcactggattctacacagggatcttaaaccaaataat
ttgttgttagatgaaaatggtgttctaaaattggctgactttggcttggcaaaatctttt
ggaagcccaaatagagtttatacacaccaggtagtaacaaggtggtaccgagccccagaa
ctactgtttggtgctagaatgtatggtgttggtgtcgatatgtgggcggttggttgtatt
ttagctgagttgctcctcagggttccttttttgcctggagactctgatcttgaccagctg
acaaggatatttgaaacactgggcactccaacagaagaacagtggcctgggatgacaagt
cttccagattatgtcacatttaagtctttccctggaatgccacttcaacatatcttcagc
gccgctggtgatgatttgctcaatcttctgcaaggcttattcacatttaatccttgcact
agggttacagctactcaggcattgaaacagaagtatttcagtaaccgaccaggacccact
ccaggaaatcagctgccaagacccaactgtcctgcagaagctgtaaaggagcaacaaaat
gcacttttaaatttaaaaaggaagagaacagaaggaatagatcaaggattaccaaaaaaa
ttgattttttga

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