Gavia stellata (red-throated loon): 104263828
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Entry
104263828 CDS
T08384
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03030
DNA replication
gste03410
Base excision repair
gste03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104263828 (POLE)
03410 Base excision repair
104263828 (POLE)
03420 Nucleotide excision repair
104263828 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gste03032
]
104263828 (POLE)
03400 DNA repair and recombination proteins [BR:
gste03400
]
104263828 (POLE)
Enzymes [BR:
gste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104263828 (POLE)
DNA replication proteins [BR:
gste03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104263828 (POLE)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104263828 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POL2_thumb
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
104263828
NCBI-ProteinID:
XP_009818978
LinkDB
All DBs
Position
Unknown
AA seq
1399 aa
AA seq
DB search
RRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKGCEREVSSFLSKKFQGKIAKLETVP
KEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVRKNRERDQASDVYTAMLSSAL
SGGSLSTDEEGASRKVSNQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTYPP
EITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSE
DIEDFEFTPKPEYEGPFCIFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEAR
AAAHGISMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYD
PVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRK
GSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSD
IPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSLKDVPN
RIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEF
MPASRSEYHRIQQQLESEKFPPLSPEGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIH
VTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCK
NMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGR
PLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQD
PASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKR
RGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISE
NRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIP
LAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVK
NPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVLANQPPVGTPSSQIGDIEDF
GAAKTVQPPVPITNKRKRVPAAEESQQMSQYLELSQSWREILGPPPPLGTTKLSKGLSSY
LRRTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVNQRVPKPEEG
AAYRRVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLLRAL
IHLGCVCMVSRQLVKHLAGREAETFDIEHLEMRSLAQFTYLEPVSIRHIYLYHSSQGSKA
LLGLFIPSQRKAAVFVLDK
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
cggcggtcggtgagcgccgtggactactacttcatccaggaggacgggagccgcttcaag
gtggccctgccctacaagccctacttctacatcgccacccagaagggctgtgagcgagaa
gtgtcctccttcctctccaagaagttccaagggaagattgcaaagctggaaactgtcccc
aaagaagacttggacctgccaaaccacttggtgggcctgaagaggaactacatcaagctg
tccttcaacacggtggatgacttggtgaaggtgcggaaggagatctctcctgccgtgagg
aagaacagagagcgagaccaggcgagcgatgtctacacggccatgctgtcaagcgctctg
agcggaggcagcctgagcacggatgaggaaggggcctccagaaaggtttccaaccagatg
gacaacattgtggatatgcgggagtacgacgtaccctaccacgttcgcctctccattgac
ctgaagatccacgtggctcactggtacaacgtgcgataccggggcagcacctaccccccc
gaaatcacccgccgagacgacctcgtggagcgaccggatcctgtcgttctcgcctttgac
attgaaactaccaaactccctttgaagttccctgatgcggagacagatcagatcatgatg
atctcctacatgattgatgggcagggctacctgatcacaaacagggagattgtctctgag
gatattgaagactttgagtttactcccaagccggagtatgagggtccgttttgcatcttt
aatgaaccagatgaagctcatttaatccagaggtggtttgaacatgtccaggagaccaaa
cccaccatcattgtcacgtacaatggagacttctttgactggccctttgtggaagcaaga
gcagcagctcatggaattagtatgtatcaggaaattgggtttcagaaggacagccaggga
gagtacaaagcatcccagtgcatccacatggactgtctaaggtgggtgaagagagacagt
tacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaactgggttacgat
ccagtggagctggaccctgaagagatgtgccggatggctacggaggagcctcagaccctg
gccacctattcagtgtccgacgcagttgctacctattacatgtatatgaagtacgtgcat
cctttcattttcgccttgtgcaccatcattcccatggagcctgatgaggtgttaagaaaa
ggatctgggacattgtgcgaggcactgctgatggttcaagcctatcatgccaacatcatc
ttccccaacaagcaggagcaggaattcaacaaactgacagaagatggccacgtgctggac
tcggagacgtacgtgggaggccacgtggaagcgctggaatctggggtcttccgcagtgac
atcccctgccgcttcaaaatgaatcctgctgccttcgatttcctggtgcagcacgtggag
aagacgctgcagcacgccatcgaggaggaggagggtttgcccttggatcaagtcaccaac
ttccaggaggtttgtgatgaaatcaaggtcaaactgaattccctgaaggatgttccgaac
agaattgagtgtccccttatctaccatctagacgtgggggccatgtaccccaacatcatt
ctgaccaacaggttgcagccctcagccatggtggatgaggccacgtgtgctgcctgtgac
ttcaacaagccaggtgccaactgtcagcgccggatgacttggcagtggagaggagagttc
atgcctgccagccgcagtgagtatcaccgcatccagcagcagctggagtcggagaagttc
cccccgctgtcccccgagggagcaccccgcgccttccacgagctctcccgggaagaacag
gccaagtacgagaaaaagcggctggcagattactgccgcaaggcgtacaagaagatccat
gtcaccaaggtggaggaacgagtcaccaccatctgccagcgagagaactctttctatgtg
gacacggtgcgagctttcagggaccgtcgctacgagttcaaagggctgcacaaggtgtgg
aagaagaagctgtctgcagcggtggagacaggagacgcctctgaagtgaagcgctgcaag
aacatggaaatcctgtatgactccctgcagctggcccacaagtgcatccttaactctttc
tacggctacgtcatgcggaaaggagctcgctggtactccatggaaatggctggcatagtc
tgcttcacgggagcaaatatcatcacccaggccagggaactgatcgagcagattgggaga
cctctggaactggataccgatgggatttggtgtgtcctccccaatagcttcccggagaac
tttgtcatcaagtcaaccaatgccaagaaaccgaaggtgacaatctcctacccaggtgcc
atgctgaacatcctggtgaaggaaggcttcacgaatgatcagtaccaggaactgcaggac
ccagcctctctcacctacgtcacacgctcggagaacagcatcttttttgaagtggatgga
ccatacctggccatgatcctcccagcttccaaggaggagggcaagaagctgaagaaaagg
tacgcggtattcaacgaggacgggtcgctagccgagctgaaggggtttgaggtgaagcgc
cggggagagctgcagctggtgaagatattccagtcttctgtatttgaagcctttctgaaa
ggcagcaccctggaggaggtctacgcttctgtggccaaggtggctgattactggctggat
gtgctctacagcaaggctgccaacatgcctgattcggagctgtttgagctgatctcggag
aaccggtctatgtcgcgcaagctggaggactatggggagcagaagtccacctccatcagc
actgccaagcgcctggcagagttcctgggggaccagatggtgaaggatgcagggctcagc
tgccggttcatcatttccaagaaaccagaagggtctccggtcaccgagagagccatcccc
cttgccatcttccaagctgagcccagtgtgcgcaaacactacctccgaaaatggctgaag
agcccctcactgcaggacttcaacatccgtgcgatcctggactgggactactacatcgag
agactgggcagcaccatccagaaaatcatcaccattcccgcagccctgcagcaggtaaag
aacccagtaccacgggtccggcacccggactggctccacaagaaactcctggagaagaat
gatgtgtacaaacagaaaaaaatcaatgaactcttcacttcggaaggcaagagacaggtc
ctcgccaaccagcccccagtggggacgcccagttcacagattggtgacatagaggacttt
ggggctgccaagactgttcagccaccggttcccatcacaaataagcggaagcgagtccct
gcagcagaggaaagccaacagatgtcccagtacctggagctatcccagtcctggcgagag
atcctgggtccacctccacccctgggcaccaccaaactctccaaagggctgagcagctac
ctgcgaaggacagcgcgcagcatcctggacttgccctggcagattgtgcagatcgccgag
accagccaacctgggctgttcaggctgtgggcggtgatcgggagcgacctgcactgcatc
aagttgagcatcccccgggtcttctatgtcaaccagcgcgtcccgaagccggaggaggga
gcagcctacaggagggtgaacaggatcctgccccgctcaaacttagtttacaacctctat
gaatactccgtccctgaagacatgtaccaagagcacatcaatgaaatcaatgcggacctc
tctgctccagacatcgagggagtgtatgagacccaggtgccgctcctcctccgtgccctg
atccacctcggctgcgtgtgcatggtcagcaggcagcttgtcaagcacctggcggggcga
gaggccgaaacctttgacatcgagcacctggagatgcgctcgctggcccagttcacttac
ctggagccagtaagtattcgccacatctatctctaccacagctcccaaggcagcaaggcg
ctcttgggcctcttcatcccctcgcagcgcaaagctgccgtctttgtgctggacaag
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integrated database retrieval system
