Gavia stellata (red-throated loon): 104264075
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Entry
104264075 CDS
T08384
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste00100
Steroid biosynthesis
gste01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104264075 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gste01006
]
104264075 (FDFT1)
Enzymes [BR:
gste01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104264075 (FDFT1)
Prenyltransferases [BR:
gste01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104264075 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
Motif
Other DBs
NCBI-GeneID:
104264075
NCBI-ProteinID:
XP_009819304
UniProt:
A0A093F238
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
ISMEFRNLSKVYQDVISDICHKMGIGMAEFLEKKVDSQHEWDRYCHYVAGLVGIGLSRLF
SASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYAKKLSDLA
KPENIDMAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNK
QVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKTQQVIASIR
AMSLPGGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKATEEYVQAGEN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atctccatggagttcaggaacctgtcaaaggtctaccaggacgtgatttcagatatctgc
cacaagatgggcatcgggatggcggagttcttggagaagaaggtggactcccagcatgag
tgggataggtattgtcactacgttgctgggctggtggggatcggcctttcccgtctcttc
tctgcatcagagctagaagatcctattgttgggcaagacacggagctggcaaactccatg
ggccttttcctgcagaaaaccaacatcatccgtgactatctggaggaccagctggaggga
agggagttctggcctagggaggtttggagcagatatgcaaagaagctctcagatcttgcc
aaaccagagaacatcgatatggctgtccagtgtctgaatgagctcatcaccaatgccctc
caccatgtccctgatgtcctcacatacttatcccgcctgaaaaaccaaagtgtcttcaac
ttctgcgctatcccccaggtgatggctattgccacattggctgcctgctataacaacaag
caagtgttcaggggagtcgtgaagatccggaagggacaagccgtcactctaatgatggat
gccacaaacatacaagctgtcaaagccatcatgtaccagtatgtggaagagatctaccag
aagatcccaagcacggacccatcatccaacaagacgcagcaggtcattgcctccatccgt
gccatgagcttgcccggtggccccatggcatcacgccaccactactcccccatctacctg
tcgtgcgccatgctcctggccgccctgagctggcagtacctgagcaccatctccaaggcc
accgaggagtacgtccaggcgggcgagaactga
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