Gavia stellata (red-throated loon): 104264127
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Entry
104264127 CDS
T08384
Symbol
PCDHA1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-1
KO
K16499
protocadherin delta 2
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gste04515
]
104264127 (PCDHA1)
Cell adhesion molecules [BR:
gste04515
]
Cadherins
Protocadherins
104264127 (PCDHA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
104264127
NCBI-ProteinID:
XP_009819362
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
IESPLELYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHT
YRLSPNGFFSLEVQTRSDASKFAELVLERALDREQQRTHQVLLTALDGGVPERSGTAQIL
VTVLDANDNVPAFDQPSYSVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRV
RELFHVVPRSGQVLLKGPLDYERASLHELYVQAKDRGPSAVPXAVHCRVLVHLLDVNDNA
PEVTLTSVSMPVLEDAPPGTVIAVISVLDRDSGDNGRVSCEVSPDVPFELHSSFRNYYTL
VTTQALDREVVPEYNVSITARDMGSPALLTRSVLTIPVSDVNDNAPRFLQPSYSVYVMEN
NAPGASICSVSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQ
IRSFQIQVQAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPDATRQR
LVVQVRDGGQPALSATMSLLLSVVETMPQTLSDFSEFSLPPEVSSSSPLTLYLLVSLGSI
SFTFLLAILILTAIR
NT seq
1664 nt
NT seq
+upstream
nt +downstream
nt
atcgagagcccgttggagctctaccgcgttgaggtagaggtgctggacatcaatgaccat
gcgcccaccttcccctggcaagagtatgtgctggaggtggccgagtccgccgtgcttggt
gcccgcttcccattggagagtgcccaggatcctgacgtgggcaccaactcggtgcacacc
taccggctcagccccaacggtttcttttcgctcgaggtgcagacacgcagtgatgccagc
aagtttgcagagctagtgctggagcgcgccctcgaccgcgagcagcaacgcacgcaccag
gtgctgctcactgctctcgacggcggtgtccccgagcgctcaggcacagctcaaatcctt
gtcacagtgctggacgcaaacgacaatgtgcctgcctttgaccagccctcgtacagcgtg
agccttcccgaggatgcccctgctggcaccctggtcatccagctcaatgccactgacctg
gatgagggccccaatggggagatcgagtactccttcagcgggcacgcaccaccgcgcgtc
cgggagctcttccatgtggtgccccgcagtgggcaggtgctgctgaagggccccctggac
tatgagcgggcaagcctccacgagctctatgtgcaagccaaggaccggggaccctcggct
gtgccgtaggccgtacactgccgggtgcttgtgcacctccttgacgtgaatgacaatgcg
ccagaggtgaccctcacgtctgtgtccatgcccgtgctggaggatgccccaccaggcacc
gtcattgctgtcatcagcgttctggaccgggactctggggacaatggtcgtgtgagctgc
gaggtcagccccgacgtcccctttgagctccactcctccttccgcaactactacacgctg
gtcaccacgcaggcactggaccgagaggttgtgcccgagtacaacgtaagcatcacagca
cgggacatgggctcgccagccctgctgacccgcagcgtcctcaccatcccagtatccgat
gtgaatgacaacgccccacgcttcctccagccttcctacagtgtctacgtgatggagaac
aacgcaccaggtgcctccatctgctccgtcagcgcgttggaccccgactgccaacaaaat
gcctacctgtcctactccattgctgatgggcacatccatggcatgcctgtgggcacctat
gtgtctatcaactcagacagcgggcacatgtatgccctgcgctccctcgattatgagcag
atccgcagcttccagatccaggttcaagcacaggacgcaggtttccccccactcagtgcc
aatgtcaccgtccacatcttcgtgctggatcagaacgacaatgctccggtcatcgtttcc
cccatgccgcgcaatggctctgtggccaccgagctggtgccagatgcaacccggcagcgg
ctggtggtgcaggtgcgggatggtgggcaaccagccctctcagccaccatgtccctcctg
ctttcggtggtggagaccatgcctcagactctctctgacttcagcgagttcagcctcccc
ccagaggtctcctcatcctccccactcaccctctacctccttgtctccctgggctccatc
tccttcaccttcctccttgccatcctcatcctcacagccattcg
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