Gavia stellata (red-throated loon): 104264401
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Entry
104264401 CDS
T08384
Symbol
UTP20
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gste03009
]
104264401 (UTP20)
Ribosome biogenesis [BR:
gste03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104264401 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7553
Motif
Other DBs
NCBI-GeneID:
104264401
NCBI-ProteinID:
XP_009819780
LinkDB
All DBs
Position
Unknown
AA seq
2784 aa
AA seq
DB search
FLTFSERLSNVNIDVIHRIDRTGSYAEEVETYFFEGLRKWRELNLTQHFVQFYNEVVDKC
QSFNQLVYYQSAIVQSLKIHLQVEGSLAYQPLLDLVVQLARDLQADFYPHFHDFFLAIIK
LLDTRDTELLEWAFTSLSYLYKYLWRLMVKDIDNIYSLYSTLLAHHKLHIRNFAAESFVF
LMRKVSDKNAIFNLMLRDLGEHPEKVEGVGQLLFEMCKGVRNMFHSCAETAMKLILLKLG
PITEEEIELPWVTVGEAFEWMIRSAVVHIHKEHFNIVLKCLEESLLDLQRKTTKANCCMA
SEQMERILQAYLILVEHANGSKISLPEDVCQTLIKMLQTPDLSXXXXXXXXXXXLNTISA
FLLAENVFLPDSLTKEAIEKVFASGFERRFLLDFSEAMFTMKQFERHFLPCFLKYIEHCF
SDTDALTKDEAMAILAKLILVKAEPPTIGSMAFEKYPLVFTESSVSSNTRQQTSKRQGGK
AEVPVLDHVLSLIHLPEKEDITDLSQPWVALVVLPHIRPMDKENILPHVTSFIDSVFTAI
DKGSLCKGSLFVACQAVSTLLSLAESSEILHLLPVERVKSLVTTFPSDPSALLLADLYYT
RLALCGCQEPLSQGNLMDLFEKLHPNISTGVSKVRLLTVRILNHFENPPSTQIEDDGTGE
LQPIFAILLQAELVPATVNDYREKLLHLRKLRCDVVQSGIQSGSLQEVPLRYLLGMLYIN
FSPLWDPVIELITSYAKEMENKQFWKVLYEHLERAATYAEMELQNELDEQEESIAEIESE
KMPERGVGTVFLEQLRTRTDCSERLDHTNFRFLLWKALDKFPDRVEPRSRELSPLLLRFI
RNEYYPADSLVAPSQDLRKKTSDTVAAKEIPGEEVNGVATEEEEEEEKEEGEPITVGLPK
KKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSHQDQNVQRIALDCIMTYK
HPHLLPYRENLQRLLEDKSFKEEIVHFSISEDTAVVKMQHRPDLIPVLMRILYGRMRNKT
GSKTQGKSSAGTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGPCQTAVLRSMSELD
LAKVLPLGRQHSLFNGLEVVLKNMGHLIHQYLPEILQILLCMTAVVSCILQQREKVQPRL
INPLKNLRRLGLKLVVEFFSDYETYSFSVEEVDAVFHAVVWPQVCRLTSESQYSPTFLLK
LIHTWSKNPRYFPLLAKQQPDHPECDILSNVFAVLSAKNLSEATSSLVMDIADSLLNSPD
FQPTEQVSSLSVTDCVVMVTGDVTEETLSLGCRLVLPHVPAILQYFSKTMLNVEKVKKKK
YRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQSNMEQGTEIDILETVQNLLRHC
SNPTSFLKPLAKLFSVIQNKLSRHKLCLVFQTLSDLDSELKYITDVVKLNAFDQRHLDDI
DFDVRLSAFQSITAHIKEMQAVDIDFLIPVMHNCFYTIQLGDMALSDNASLCLTSFICRL
AEMDHTEDDYKELIQHTLLESVRRGLKSKTESIQQDYTSLLSCLIQTFPANPEFRDLVQL
TNRHDPDMDFFENMKHMQIHRRARALRKLAKQLTEKKLVLSSKSLQNYIMPYATTAIFNE
KMLKHENMVTASVEVVGAVCQHLSWSAYLYHLKHFIHVLQTGQISPKLGVSVLETVLEAF
HFDYETLEKQLVTIENHEAAAMDCDPVVEGEEAMELEQSEGEEEVVEKNKGENLPEEPAE
PEHAAEASEDAEQVTKPVSFLPRNKEELECLIKHIQDTVTVNILPKLHRCIVAKVKRDEE
HKLVKSSVVNDDEVVRVPLAFAMVRMMQCLPQEVMEANLPSILLKVCTFLRNRFQEIRDI
ARNTLTKIMEVLGVQYLLYILKEMQSALVHGYQLHVLTFTVNLLLKGLTTRLSAGDLDPC
LDILIEIFNRELFGNVAEEKEVKGIVSKVMEARKNKSYDSYEILGKFIGKGQVTKLILPL
KEILESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLISENLPLLTEKAKKK
VAPPPDPRLQPESCLLLQPTPTRGGQKAHVSSRTNTYILVDSGLRLLHMSLKRSKVNSSE
EHVLEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSVSTNLEPLIKQLFLLLK
EFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLGFAEEDIYDSSRQATAF
GLLKAILSRKLIVPEIDDVLQKIAQLAITGQSEPVRVQCRQIYLKYILDYPLGDKLKPNL
DFVLAQLEYEYETGRESALEMIAYLLDMFPQDLLHKYCGLFFLSLCMMMINDDSAKCKKM
AALTCKSLLSKINNEKQDLMFSLVTEWFHSKKSSHRRLAAQACGLFVEVEGVMFERRLEA
VLTLIEKEINPIKFEEITEEEEEKAADRLLFSFLVLVTKLITECNLIQLTKNSDVVSNIW
GHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVSKWRERKAGKRKKTSAELSASTVFL
TAELDKKMKELVFAFCHQLQSKFLDLSLGEQVIKNLLFVAKVVYLLAPALEEGKEAEGEL
GCEVEEQEASENEEEKDISAQGKGGREDTEEKGQPATLLWLMKKLSLMAKREAAYSPKIP
LKRSCIFKFLGAISVDLGKDRIKPYLPTILTPLYRELNSTYAEQDPTLKNLSQEIIELLK
KLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRKLKRHKNKAVTRKRKT
EFLHPTYKAKRRRSQALKDLAMVE
NT seq
8355 nt
NT seq
+upstream
nt +downstream
nt
tttcttaccttttcggagcgcctaagcaatgttaatattgatgttattcatcggattgac
agaactggaagctacgctgaggaggttgaaacgtacttttttgaaggtctacggaaatgg
agggagctgaacctcactcagcattttgtgcaattctacaatgaagtggtggacaaatgc
cagtccttcaaccagctggtctattaccagagtgccattgtgcagagcttgaagatacat
ttgcaagttgaaggcagtcttgcttatcaacccctattagatctagtggtgcagctagct
cgagatcttcaggctgatttctatcctcactttcatgactttttcctggccattatcaag
ttactggatacacgggacacagagctgctggaatgggcttttacatctctttcctatctc
tacaaatacttgtggagattgatggtgaaggacatagacaacatatacagcctgtacagc
accctgctggctcaccacaaacttcacatcagaaactttgctgctgaaagttttgtcttt
ctaatgagaaaggtttctgataaaaatgcaattttcaatttaatgctccgtgacctgggg
gagcaccctgagaaggtggaaggtgtaggacagctactttttgagatgtgcaagggtgtt
cgaaacatgttccactcttgtgcagagacggctatgaagttaattctgttaaagctggga
cctattaccgaagaagaaattgaactaccgtgggtaactgtaggagaagcctttgagtgg
atgatcagatcagctgtagtacatatccataaggagcattttaacattgtcctcaagtgt
ctggaggagtcactcttagacttgcagaggaaaacaactaaggccaactgctgtatggca
tcagagcagatggaaaggattctgcaagcatatctgatcctagtggaacatgcaaatggt
tccaaaatctcactgcctgaagacgtctgtcagactttaataaaaatgttgcaaacacca
gatctctcatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgctgaacaccatttctgca
ttcctgttggccgagaatgttttcttgcctgattctttgaccaaggaagctattgagaag
gtatttgcaagtggatttgaacggcgctttcttttggacttctccgaagcaatgttcaca
atgaagcaatttgagaggcattttcttccatgctttctaaagtacattgagcattgcttc
tctgacacagatgcccttacaaaggatgaggcaatggcaattctggctaaactcattctg
gtgaaagcagaacctcctaccattggttcaatggcatttgaaaagtatcctctcgttttc
actgaatcatctgtcagctctaatacaaggcaacaaacaagtaaaagacaaggaggaaag
gcagaagtgccagtgttggatcatgtactgtctttaatccatttaccagagaaggaagat
atcacggacctttcacagccttgggttgctttggttgtactgccacatattagaccaatg
gacaaagaaaacattctgccccatgtgacaagttttatagacagtgtcttcacagccatt
gacaaaggaagcctctgcaaaggaagcctgtttgtggcctgccaagctgtaagtactctt
cttagtttggcggagtcttctgaaatactccatttgttacctgtggagcgtgtcaagagc
ttggtgaccactttcccttcagacccctctgccttgctgttggctgatctctattacacg
aggttggcattgtgtggctgccaggaacccctttctcaagggaacctaatggacttgttt
gagaagttgcatcctaatatttccactggtgtttccaaggtccggctattgactgttcga
attctaaaccattttgagaatccaccttctacacagattgaggatgatggcacaggggag
ctccagccaatatttgccatattgctccaagcagaacttgtgccagcaacagtgaatgat
tacagagagaaacttctccatttgaggaaactaagatgtgatgtagtgcagtctggaata
caaagtggatctttgcaggaggtgcctcttcggtatttactgggaatgctctatattaac
ttcagccctctctgggatcctgtaattgaactgataacttcttatgcaaaggaaatggag
aataaacagttctggaaggtcttatatgaacatttggagagggctgctacctatgctgaa
atggagctgcaaaatgaactagatgaacaggaggaaagcattgctgaaatagaaagtgag
aagatgccagagagaggagtggggactgtcttcctggagcagctgaggactagaacagac
tgcagcgagcggctggaccacacaaatttccgttttctactgtggaaagcactggataag
tttccagacagagtggaacctaggtcgagggaactttccccacttcttttgagatttatt
agaaatgagtactacccagcagattcgttagtggctccatctcaggatcttagaaagaaa
acgagtgatacagtagcagcaaaagaaatacctggtgaagaggtgaatggtgttgctacg
gaggaggaggaggaagaagaaaaggaagaaggggaaccgattactgtaggactaccaaaa
aagaaaacaagaagagctgctgctaagcaactaatagcccacttacaagttttctctaaa
ttctcaaatcctcgtgcattgtatctggagcagaagctgaacgcattatatacccagtta
ctgtcccatcaagaccagaatgtacagagaatagctcttgactgtataatgacatacaag
catcctcatctactgccatacagggagaacttgcaaaggctactggaggacaagagcttt
aaagaagaaatagtccatttcagtatttctgaggacactgcagtagtaaaaatgcagcat
cgaccagatctcatccctgttcttatgagaattctctatggcagaatgagaaacaaaaca
gggagcaaaacacagggcaagtcttcagcgggcactcgcatgtcgatcgttctgcgattt
cttgccggctcactgccagaagagatacggatgtttttggatctgctctttgaagctgtg
aagcaattcagtaatgggccttgccagactgcagtgcttcgaagtatgtcagagctggat
ttagctaaagtcctgcctcttgggcgtcagcatagccttttcaatggtctcgaagttgtg
ttgaaaaacatgggacatttgatccatcagtacctgcctgaaattctacagattctcctc
tgcatgacggctgtggtatcctgcatcctccagcaaagagagaaggtccaaccgaggttg
attaatccactgaagaatttgagacgtcttggactcaagcttgtggtggagtttttttct
gattatgagacctacagctttagtgtggaagaggttgatgcagttttccatgcagtggtg
tggcctcaggtctgcagattgacttcagagagtcagtattctccaacttttctgctcaaa
ctcattcacacctggagtaagaaccccaggtatttccccttgctggcaaagcagcagcca
gatcacccagagtgtgatatactgtcaaatgtgtttgctgtcctgtcagccaagaatctg
tctgaggccacatccagtcttgtgatggacatagctgatagccttctcaacagtccagat
tttcaacccacggagcaggtttccagtttgagcgtgactgactgtgttgtcatggtcact
ggagacgtgacagaagagaccctcagcctaggttgccgcttggttctgcctcatgttcct
gccatacttcagtacttcagcaaaacaatgttaaatgtggagaaggtgaaaaagaagaag
tatagagctcaagtcagcaaagagctgagtatactttccaagatcagcaaatttatacaa
gaaaagagtcagaattcagtgcttgtgagccttctcctccctttcctttatcagagtaac
atggaacagggtacagagattgacattctggagacagtgcagaacttgctgaggcattgc
tcaaaccctacaagctttctcaaaccactggcaaagcttttttctgtcatccagaacaaa
ctgtctcgacataagttgtgcttggtatttcagactttatctgatttggacagtgaattg
aagtatattactgatgttgttaagctgaatgcctttgatcaacggcatctcgacgatatc
gacttcgatgtacgtctgtcagcattccagtcaatcacagcccacatcaaggaaatgcaa
gcagtggatattgacttcctcatccctgttatgcacaactgcttctataccatccagcta
ggggacatggctcttagtgacaacgcaagcctttgcttgaccagttttatctgccgactg
gcagaaatggaccacacagaagatgattacaaggaactaatccagcatactctcctggag
tctgtgagaagggggctgaagagtaagactgagagcatccagcaggactacacatcgttg
ctttcctgcctcattcaaacattcccagcaaatcctgaattccgggatttggtccagtta
accaaccgccatgatcctgacatggacttctttgaaaacatgaaacacatgcagatccac
aggagggcacgagctctgaggaaactggctaagcagctcactgaaaaaaagcttgtgctg
tcttccaaatccctacagaactacatcatgccttatgctactactgccatttttaatgaa
aaaatgcttaagcatgaaaatatggtaacagcctcagttgaagttgttggagctgtctgc
caacatctctcgtggtcagcatacttataccacttgaagcatttcatccatgtcctgcaa
acagggcagatcagtccaaagctgggagtcagtgtattagagacagtgctggaagccttt
cactttgactacgaaacacttgaaaagcagcttgtgaccattgagaaccacgaagctgct
gccatggactgtgatccagtagtggagggtgaagaagccatggagctggagcagagtgaa
ggagaagaggaggtcgttgagaaaaacaaaggggagaatctccctgaggagcctgcagaa
cctgagcatgcagctgaggcatctgaagatgctgagcaagtgaccaaacctgtttctttc
ttaccccgaaataaagaggagctggagtgtctgatcaaacacattcaagatacagttaca
gtcaatatcttgcctaaattgcacaggtgtattgttgcaaaggttaaaagagatgaggag
cacaagcttgtaaaatccagtgttgtgaatgacgacgaggtagttcgtgttccattagct
tttgcgatggtcaggatgatgcagtgtcttccgcaagaagtgatggaagccaacctgcca
agcatccttctgaaagtctgcacatttctgaggaacagatttcaggaaatccgggacatc
gcccgtaacaccctcactaaaatcatggaagtgttgggagtgcaataccttctgtacatc
ttaaaagagatgcagtccgctctcgtccatgggtaccagctccatgtgctgactttcact
gtgaacctgttactgaagggccttactaccaggctcagtgctggtgatttggacccctgc
ttagatatcctgattgagattttcaaccgagagttgtttgggaacgtagctgaagagaag
gaagtgaagggaattgtctctaaggtcatggaagcacgcaagaacaagagttacgattct
tatgaaattcttggaaagttcataggaaagggccaggtgacaaaacttattctgccactg
aaagagattctggagagcaccacaagcttgaagatagtccggaaggtgcatgaggcgctg
cgtcacatcatggcagggctgatcttcaattcagatatgaacgcagaatccctcctcctc
ctcagtcatggtctcatcagtgaaaacttgcctctgctcactgagaaggctaaaaaaaaa
gttgcccctcctccagatcctcggctgcaaccagagagctgcctactactccagcccact
cccacgagaggagggcagaaagcacatgtcagcagcaggactaacacgtatatcttggtt
gattcaggacttcggctgctgcacatgagcctgaagaggtccaaagtaaattcttctgag
gagcatgttttggaaatgttagacccttttgttcagctgcttatagactgcctgaaatct
atggatgtcaaggtgataactggtgctctgcagtccttggtatggattttaaagttccct
ttgccttctgtgagtacgaatctggagccactgatcaagcagcttttcctcttgctgaaa
gaatttgccaagacaggaatagccaaaggccagaatttccacctggttgtgagctgtttc
aaatgtgtaacaatacttgtgaagaatgcaaagagtcagataacaagcaaacagctccag
gtgttgcttggttttgctgaagaagacatttatgattcatcacgccaagccactgccttt
ggccttctcaaggctattttatccaggaagctgattgtccctgaaattgatgatgtgctg
cagaagattgcccagctagccatcacaggtcagagtgagccggtccgagtccagtgcagg
cagatttacttaaaatatattctggactacccccttggcgacaagctgaaacccaatttg
gatttcgtgctcgcacaactagagtacgagtatgaaactggaagggaatctgcactggag
atgattgcgtacctccttgacatgttcccacaggatctccttcacaaatactgtggactg
ttttttctctctctttgtatgatgatgataaatgatgactctgccaaatgcaaaaagatg
gcggctttgacatgtaaatcgctcctcagtaagataaacaatgaaaaacaagatctgatg
ttttctctggtcacagagtggtttcacagcaagaagagctcacacaggaggttggctgcc
caggcgtgtggtttgtttgttgaagtggagggagtaatgtttgaacggcggcttgaagct
gtcctcaccttgattgaaaaagaaatcaacccaattaaatttgaagagataactgaagag
gaggaggagaaggctgcagataggctgctattcagctttcttgtgctggtaacaaagcta
atcacagagtgcaacttgattcaattaaccaagaacagtgatgttgtgagtaatatctgg
ggtcatgtccagtctcacctatggtatcctcacagctgggtctggctgacagctactgag
atctttggcttgttgtttgcatcttacaagccagaagatcttgtcagcaagtggagggaa
agaaaggcagggaagaggaaaaagacatcagcagagctgtctgcatccacagtcttcctg
actgctgaactggacaaaaagatgaaggaactcgtgtttgcattctgccatcagctgcag
tccaagttcctggacctgtctctgggagagcaggttataaagaatttgctttttgtggca
aaagttgtttacttgctagcccctgccttagaagaaggtaaagaggctgaaggagaactt
ggctgtgaagtggaagagcaggaggcctcagaaaatgaggaagagaaagacatttctgct
cagggaaagggaggaagagaagacacggaagagaaaggccagccagccacactgctatgg
ttaatgaagaagctctctctcatggcaaagcgagaagcagcatattcccctaagatccct
ttaaagagaagctgcatctttaagttcctgggagcaatttcagtggatctggggaaagac
aggatcaagccataccttccaacaattctcacccccctgtacagggagctgaacagcacc
tatgcagagcaagatccaacactgaagaacctttcccaagaaatcatagaactgctcaag
aagttagttggactggaggctttttcgcttgccttttcttctgtgcagaaacaggctaat
cagaaaagagcgatgaggaaaaagcagagggctttgcagactgtagcaaaccccgacatt
gctgcaaggaggaagctgaagagacataagaataaagcggtaaccaggaagagaaaaaca
gaattcttgcaccctacctacaaggcgaagagacgtcgaagtcaagcactgaaagattta
gcaatggtggaatga
DBGET
integrated database retrieval system
