Gavia stellata (red-throated loon): 104264557
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Entry
104264557 CDS
T08384
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104264557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104264557
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104264557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
104264557
NCBI-ProteinID:
XP_009819985
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
DTTGKQEDGPISGHAESSHPLQDAPQENRPVSNEDREMSQHALPSGEDDEDDSDSDSDDD
DVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAGNINGLPVIEV
DLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPISTENKITVQQ
GRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEG
RRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPP
PHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPASYNNRQPP
PFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSSSHWEYSGSRRERERERERERERE
RDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSREREDRHRERRHRDKEESS
KHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKETSEDGAQEGEEQDAKE
NT seq
1595 nt
NT seq
+upstream
nt +downstream
nt
acgacaccactggtaagcaagaagatggaccaatttctggacatgcagaatcttctcatc
ctttgcaagatgctcctcaggagaatcggcctgtcagcaatgaagaccgagagatgtcgc
aacatgcccttccaagtggtgaagatgatgaagatgacagcgatagcgacagtgatgatg
atgacgtgaaagttactattggcaacattaaaacaggagcaccatcgtacatgggaactc
ctatgaatctgaacttaaaaacgggtagaggctatggagcatctgcttcagccaagttgc
agcccaaaggtattgacttagatgccgcagggaatataaatggattgcctgttatagaag
tggatttagattcatttgaagacaaaccgtggaggaaaccaggtgctgatctttccgatt
actttaattatggattcaatgaagaaacgtggaaagcttattgtgaaaagcagcgacggc
ttcagcttggactggatcctgctcctccaatcagcactgaaaataagatcacggttcagc
aaggaagaacaggaaatgctgaaaaagaagtggaaaacaacatcatcaaaacagaattca
aaacagacttcttggctctggtgggaggacgcatgaaggctgggcctcctcctaacagga
agctgggtgggacaattgatgtgatcggtggccaggcaggcacaattaggagagtggaag
gaagacgtcgtgataagcatgcctctgaggaaaacccaattcaggtccttggagaccacg
gaagtaagccacagcccccacagcaaccccagcagccatctcagccccaacagccacctc
agcaacagccgtttgcaccaccagcaggcccaccgcctcccccgctcgctgggccacctc
caccacacttcctccaccctcctccaccagttacttctgttccacctcccctgcatcctc
caggtctgccaccacccggtcctattccagggttgttcccgccgcctctggcaccaccac
cagctctcctcattccaaccttggatggccagccagccagctacaataacaggcagcctc
ctccatttggctacaactctgcagattcaggttttatcagctacccacccatctccacat
cccacacgccctgggtgacgacggtggacaaaggcacaagcagttccagcagcagccatt
gggagtactccggctcgaggcgtgagagggagagggagcgtgagcgggaaagggagaggg
agagagacagagaccgcactcccaccactagtgaatacaacaatgatgatgaacgatacc
gctactacagccgagagcgcagctacgactttgagcgtgactaccgccggagtcgagacc
gcagcagggagcgagaggatcgtcaccgagagcgcaggcacagagacaaagaggagagca
gcaagcataagtcttcaagacgcaagcaacacgagagcgaggagggggagagtcatcggc
ggcacaagcacaaaaagaacaagcgcagcaaagaggagaaggagaccagtgaagatggtg
cccaggagggagaggagcaggatgccaaggagtaa
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