Gavia stellata (red-throated loon): 104264758
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Entry
104264758 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gste03009
]
104264758
Enzymes [BR:
gste01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104264758
Ribosome biogenesis [BR:
gste03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104264758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
FtsJ
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
BMT5-like
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
104264758
NCBI-ProteinID:
XP_009820253
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
QLLLRITPNFXPLLLPVVKEKVSPQKEERAVKAAGQTPRGRSGFSDGNSKWLAPAKAKKI
PSKGNDVELASDGEVEEGSWEMEEEEEDGSSEEMVDDYGASSSEEEELLPIEKAALKQKP
DRGGLSEDDSEEEEEEASRQKMGQKEEENPDLQLNLDIDEQFKLPTNEQIEKEAAEPPDL
HIIHQRIKGNMEVLQDFVVKREEGRTRQEYLALLRRDMAAYYSYSDFLLMKFMDIFPLPE
LINFLEANEVPRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIG
ATPEYLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGTILAND
SNAERLRSVVGNLHRLGVTNAIVSNCDGRQFPKVLGGFDRVLLDAPCSGTGVISKDPAVK
TNKDEKDILRCAHLQKELILSAIDSVNAASETGGYIVYCTCSVTVEENEWVVDYALKKRN
VRLVATGLDFGKEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKFKKFSNAIPQAQK
DEEPAVEAATPSAVPDTVMEPQPKKKKLEGSEVDKEQKPPQPALKKRHSLQAQRRPLKAG
RPSPKMMCPQVPTGKKHRVKPKGQ
NT seq
1877 nt
NT seq
+upstream
nt +downstream
nt
ggcagctgcttttgagaataacgcctaatttttaaccgctccttctgcctgtagttaaag
agaaggtatccccgcagaaggaggaacgtgccgtaaaggcagcaggacaaacccctcgcg
gccgctctggcttcagcgatggcaattcaaaatggctggctccagccaaagccaagaaaa
tcccatctaaaggaaacgacgtagagttagccagtgatggtgaggtggaagagggcagct
gggagatggaggaggaggaagaggatgggagcagcgaggagatggtggatgattatggtg
cctcatcatcagaagaagaagagttgctgcctattgaaaaagctgccctgaagcagaagc
ctgacaggggaggcctcagtgaagatgacagtgaagaggaggaggaggaggcaagcaggc
aaaaaatgggacagaaggaagaagagaacccagatctgcagctcaacctggatatagatg
aacaatttaaactgccgactaatgaacagattgagaaagaggctgctgagccgcctgacc
tgcacatcattcaccagcgcatcaagggtaacatggaggtgctgcaggactttgtggtga
agcgggaggaaggacgcacgcgacaggagtacctcgcattgttgcgccgggacatggctg
cctactattcctatagtgacttcttgctcatgaagttcatggacatcttcccgctccctg
agctgataaacttcctggaagccaatgaggttcctcgccctgtgaccattcgcaccaaca
cactcaagacgcggcgacgggacctggcgcaggctctaatcaaccgtggcgtgaatcttg
accccttggggaagtggtcgaaaacgggacttgttatttatgactcctctgtgcccatcg
gtgccacccctgagtatctggctgggcactacatgctgcaaggagcctctagtctccttc
ctgtcatggctctggctccgcaggagaacgaacgcatcctggatatgtgctgtgccccag
gaggcaagaccagctacatagctcagcttatgaagaacacaggtacgatcttggccaacg
acagcaatgctgagcggctacgtagcgtggtagggaacttgcatcggctgggagtcacca
atgccatagtgagtaactgcgatggacgccagttccccaaggtgcttggagggttcgacc
gtgtattgcttgatgctccttgtagcggaacaggcgtcatttccaaggatcctgctgtca
aaaccaacaaggatgagaaagacatcctgcgttgtgctcacctgcagaaggagctgattc
ttagcgctatagattcagttaatgctgcctcagagacagggggctatattgtctactgca
cttgctccgtcacggtggaagagaacgagtgggttgtggattatgccctgaagaaacgca
acgtccgtttggtggccacaggcctggactttggcaaggaaggcttcaccaggttcaagg
accgtcgcttccacccctccctcaagtctacgcgtcgtttctatccccacacgcacaata
tggatggtttcttcattgccaagttcaagaaattctctaatgccatcccccaggcacaga
aagatgaagaacctgctgtggaagcagcaactccgtccgctgtccctgataccgtcatgg
agcctcagccaaaaaagaagaagcttgagggatcagaagttgacaaagagcagaagccac
cacagcctgctttgaagaagagacattcgttgcaggcacagaggagacccttgaaggctg
gccggccttctcccaaaatgatgtgtcctcaagtccctactgggaagaagcatagagtga
aaccgaagggacagtga
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