Gavia stellata (red-throated loon): 104265090
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Entry
104265090 CDS
T08384
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104265090 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104265090 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gste04812
]
104265090 (VIM)
04147 Exosome [BR:
gste04147
]
104265090 (VIM)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104265090 (VIM)
Cytoskeleton proteins [BR:
gste04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
104265090 (VIM)
Exosome [BR:
gste04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104265090 (VIM)
Exosomal proteins of other cancer cells
104265090 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF1664
TolA_bind_tri
DUF7491
Phage_GP20
DUF1759
DUF4200
BLOC1_2
LAMB4
RBD-FIP
YwqH-like
T2SSF
CLZ
CENP-F_leu_zip
DUF4404
Sec10_N
Prefoldin
Golgin_A5
TMF_TATA_bd
DUF5677
Motif
Other DBs
NCBI-GeneID:
104265090
NCBI-ProteinID:
XP_009820722
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
DVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAA
LRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQSLTC
EVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN
VKMALDIEIATYRKLLEGEESRINMPIPTFASLNLRETNIESQPMVDTHSKRTLLIKTVE
TRDGQVINETSQHHDDLE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gatgttgacaatgcctctctggcacgtcttgatcttgagcgcaaagttgagtccctgcaa
gaggagattgtctttttgaagaagcttcatgatgaggaaatccgagaactgcaggcccaa
ctccaggaacagcacatccaaatcgatatggatgtttctaagcctgatcttactgctgcc
ctgcgtgacgttcgccaacagtatgaaagtgttgctgctaagaatcttcaggaagctgaa
gagtggtacaagtccaaatttgcagatctctctgaagctgctaataggaacaacgatgcc
ctgcgccaggccaaacaagaagctaatgaataccgcagacagattcagtctctcacctgc
gaagttgatgcccttaagggaagcaatgaatccctggagcgccagatgcgtgaaatggag
gagaattttgctgttgaagctgctaactaccaagacactattggccgtctgcaggatgag
attcagaacatgaaggaagaaatggctcgccatctccgtgagtaccaggacctgctgaat
gtaaagatggctcttgatattgagattgccacctacaggaaactgctggagggtgaagag
agcaggattaacatgcctattccaacctttgcttctctgaacctgagagaaaccaacatt
gagtctcagccgatggttgacactcactcaaagaggacacttctaattaagaccgttgaa
actagagatggacaggttattaatgaaacttcccagcaccatgatgacttagagtaa
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