KEGG   Gavia stellata (red-throated loon): 104265090
Entry
104265090         CDS       T08384                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gste00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104265090 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gste03019]
    104265090 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gste04812]
    104265090 (VIM)
   04147 Exosome [BR:gste04147]
    104265090 (VIM)
Messenger RNA biogenesis [BR:gste03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     104265090 (VIM)
Cytoskeleton proteins [BR:gste04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     104265090 (VIM)
Exosome [BR:gste04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104265090 (VIM)
  Exosomal proteins of other cancer cells
   104265090 (VIM)
SSDB
Motif
Pfam: Filament DUF1664 TolA_bind_tri DUF7491 Phage_GP20 DUF1759 DUF4200 BLOC1_2 LAMB4 RBD-FIP YwqH-like T2SSF CLZ CENP-F_leu_zip DUF4404 Sec10_N Prefoldin Golgin_A5 TMF_TATA_bd DUF5677
Other DBs
NCBI-GeneID: 104265090
NCBI-ProteinID: XP_009820722
LinkDB
Position
Unknown
AA seq 258 aa
DVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAA
LRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQSLTC
EVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLN
VKMALDIEIATYRKLLEGEESRINMPIPTFASLNLRETNIESQPMVDTHSKRTLLIKTVE
TRDGQVINETSQHHDDLE
NT seq 777 nt   +upstreamnt  +downstreamnt
gatgttgacaatgcctctctggcacgtcttgatcttgagcgcaaagttgagtccctgcaa
gaggagattgtctttttgaagaagcttcatgatgaggaaatccgagaactgcaggcccaa
ctccaggaacagcacatccaaatcgatatggatgtttctaagcctgatcttactgctgcc
ctgcgtgacgttcgccaacagtatgaaagtgttgctgctaagaatcttcaggaagctgaa
gagtggtacaagtccaaatttgcagatctctctgaagctgctaataggaacaacgatgcc
ctgcgccaggccaaacaagaagctaatgaataccgcagacagattcagtctctcacctgc
gaagttgatgcccttaagggaagcaatgaatccctggagcgccagatgcgtgaaatggag
gagaattttgctgttgaagctgctaactaccaagacactattggccgtctgcaggatgag
attcagaacatgaaggaagaaatggctcgccatctccgtgagtaccaggacctgctgaat
gtaaagatggctcttgatattgagattgccacctacaggaaactgctggagggtgaagag
agcaggattaacatgcctattccaacctttgcttctctgaacctgagagaaaccaacatt
gagtctcagccgatggttgacactcactcaaagaggacacttctaattaagaccgttgaa
actagagatggacaggttattaatgaaacttcccagcaccatgatgacttagagtaa

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