Geobacter sulfurreducens PCA: GSU0443
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Entry
GSU0443 CDS
T00155
Name
(GenBank) ribonuclease D, putative
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gsu
Geobacter sulfurreducens PCA
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsu03016
]
GSU0443
Enzymes [BR:
gsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GSU0443
Transfer RNA biogenesis [BR:
gsu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GSU0443
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AAR33775
UniProt:
Q74G09
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All DBs
Position
475018..476163
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AA seq
381 aa
AA seq
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MPLQPASPEIITTVDGVRRLADRLGSEPIVACDLEADSMHHYQEKVCLIQFAVPGYAAIV
DPLAAPDISPLAPLFANAAIRKVFHGADYDIRSLHRDFGIEVNNLFDTMIACQLLGEREF
GLAAQLRKRFGVELDKQYQRADWSRRPLTVGMIEYAVKDTTLLIELYRQLVAELEEKGRR
GWVEEECELLSRVRVAERGDEPFFLRFKGASRMDGRTLAVLEELLLFRDGRARQFDVPPF
KVLGTDTVRELAERRPRLPEELQGITGLTDKVAARYGEGILRAVERGCAVPAQQLPAYPR
EERRKMERGEEDRLKRLKEWRTEEAGRLGIEPGYIANNALLELVAVKAPRTMGDLEALPP
MRCWQRSEFGEQILSIVSPRR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
ttgcctctgcaacccgcttcacctgagatcatcaccaccgtcgatggagtgcgccgtctt
gccgaccgcctcgggagcgagcccatcgtggcgtgcgacctggaagcagattccatgcac
cactatcaggagaaggtctgcctgatccagttcgcggtacccggctacgccgccatcgtc
gaccccctggcagccccggacatctcaccgctggcgccgctgtttgcgaacgccgccatc
cgcaaggtctttcacggggccgactacgacatccgctccctccaccgggatttcggcata
gaggtgaacaatctcttcgacaccatgattgcctgtcagctgttgggcgagcgggagttc
ggcctggccgcccagctgcgcaagcggttcggcgtggagttggacaagcagtaccagcgg
gccgattggagcaggcgccctctcacggtggggatgattgagtatgcggtgaaggacacg
acgctcctgatcgagctgtaccggcagctggtggccgaactggaggaaaaggggcgacgc
ggctgggttgaggaagagtgtgagctgctgtcgcgggtgcgggtggcggagcggggcgat
gagccgttctttctccggttcaagggggcatcccggatggacggccggaccctggcggtc
ctggaagaacttctgctgttccgcgacggacgggcccgccagtttgatgtaccgccgttc
aaggtgctgggtaccgataccgtgcgtgaactggctgagcggcgtcctcgcctcccggag
gagctgcagggaatcaccggcctgacggacaaggtcgcggcccgctacggcgaagggatt
ctgcgtgccgtcgaacgggggtgcgcggtaccggcgcagcagttgccggcgtatccccgg
gaggagcgtcgcaaaatggagcggggggaagaagatcggctgaagcggctcaaggaatgg
cggaccgaagaggcgggacggctcggcatcgagccgggctacatcgccaacaacgctctg
ctggaactggtggccgtcaaggccccgcgcaccatgggggacctggaggctctgcccccc
atgcgctgctggcagcgcagcgagttcggcgaacagatcctgtccatcgtgagcccgagg
cgctga
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