KEGG   Geobacter sulfurreducens PCA: GSU0522
Entry
GSU0522           CDS       T00155                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
gsu  Geobacter sulfurreducens PCA
Pathway
gsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSU0522 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsu03019]
    GSU0522 (rhlB)
Enzymes [BR:gsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GSU0522 (rhlB)
Messenger RNA biogenesis [BR:gsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GSU0522 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Utp25_C AAA_22 CMS1
Other DBs
NCBI-ProteinID: AAR33853
UniProt: Q74FT4
LinkDB
Position
555697..557028
AA seq 443 aa
MKFADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLF
TKLLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNA
LKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYD
KRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFPLLLGL
LRKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIM
IATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMADEDGAFHLEA
IHEYIKDKIPVEWAEDDLFVHDFKRVKPRPKGQETRAKGPTRHGRKHPEAEKKEPEGEKK
KRSRPRRKKNPAAGEGGTPPAAE
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaaatttgccgacttgaacctgcccgagcaggtcatgcagggggtggcagacgcaggc
ttcagcgactgcacccccattcaggaaaaaacgttgcccctctcgctggggggaaaagat
gtggccggacaggcccagaccggcaccggcaagaccgcggccttcctgatcagcctcttc
acgaagcttctccgctccggacggggaggcgagcgccgccatccccgcgccatcatcctt
gcccccacccgcgagctggtggtccagatcgagaaggacgcccaggtgctcggcgcccac
tgcgggttcaccatccaggccatctacggcggtgtggactacatgaagcagaaaaacgcc
ctcaaggagggggccgatgtggtggtcggcacgccggggcggctcatcgattacctgaag
cagaaggtctactcgctcaaagagatcgagatgctggtcatcgacgaggcggaccggatg
ttcgacatgggcttcatcgccgacctccgcttcatcctccggcgccttcccccctacgac
aagaggcagaacctgatgttctccgccaccttgaaccagcgggtgatggagctggcctac
gagttcatgaacgtccctgagaaggtggcggtcacccccgaacagatgaccgccgagcgg
gtggagcaggtcctctaccatgtgggccggaaggagaagtttccgctgctgctgggcctc
ttgcgcaaggaggggatggagcggaccatgatcttcgtcaacaccaagcgtgaggcggag
ttcctggatgagcggctcaatgccaacgacttcccctgccgggtcatctccggcgacgtg
gagcagcgcaagcggctcaaaatcctggaggacttcaagagcggcaagctcccgataatg
atcgccaccgacgtggcttcgcgggggctccacatcgatggggtctcccacgtcatcaac
tatgacctcccccaggacgccgaggactacgtccaccgcatcggccgcacggcccgggca
ggtgccgagggtaaggccatctccatggccgacgaggacggagcgtttcaccttgaggcg
atccacgagtacatcaaggacaagatcccggtggagtgggccgaggatgatctcttcgtg
cacgacttcaagcgggtgaagccgcggcccaagggacaggagacccgtgccaagggtccc
acccgtcacggcaggaagcacccggaggccgagaagaaggagccggaaggggagaagaag
aaacggagccggccccgccgcaaaaagaatccggcggccggcgaggggggcacgcctccg
gccgcggagtag

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