Geobacter sulfurreducens PCA: GSU0522
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Entry
GSU0522 CDS
T00155
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gsu
Geobacter sulfurreducens PCA
Pathway
gsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSU0522 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsu03019
]
GSU0522 (rhlB)
Enzymes [BR:
gsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSU0522 (rhlB)
Messenger RNA biogenesis [BR:
gsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GSU0522 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AAR33853
UniProt:
Q74FT4
LinkDB
All DBs
Position
555697..557028
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AA seq
443 aa
AA seq
DB search
MKFADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLF
TKLLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNA
LKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYD
KRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFPLLLGL
LRKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIM
IATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMADEDGAFHLEA
IHEYIKDKIPVEWAEDDLFVHDFKRVKPRPKGQETRAKGPTRHGRKHPEAEKKEPEGEKK
KRSRPRRKKNPAAGEGGTPPAAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgccgacttgaacctgcccgagcaggtcatgcagggggtggcagacgcaggc
ttcagcgactgcacccccattcaggaaaaaacgttgcccctctcgctggggggaaaagat
gtggccggacaggcccagaccggcaccggcaagaccgcggccttcctgatcagcctcttc
acgaagcttctccgctccggacggggaggcgagcgccgccatccccgcgccatcatcctt
gcccccacccgcgagctggtggtccagatcgagaaggacgcccaggtgctcggcgcccac
tgcgggttcaccatccaggccatctacggcggtgtggactacatgaagcagaaaaacgcc
ctcaaggagggggccgatgtggtggtcggcacgccggggcggctcatcgattacctgaag
cagaaggtctactcgctcaaagagatcgagatgctggtcatcgacgaggcggaccggatg
ttcgacatgggcttcatcgccgacctccgcttcatcctccggcgccttcccccctacgac
aagaggcagaacctgatgttctccgccaccttgaaccagcgggtgatggagctggcctac
gagttcatgaacgtccctgagaaggtggcggtcacccccgaacagatgaccgccgagcgg
gtggagcaggtcctctaccatgtgggccggaaggagaagtttccgctgctgctgggcctc
ttgcgcaaggaggggatggagcggaccatgatcttcgtcaacaccaagcgtgaggcggag
ttcctggatgagcggctcaatgccaacgacttcccctgccgggtcatctccggcgacgtg
gagcagcgcaagcggctcaaaatcctggaggacttcaagagcggcaagctcccgataatg
atcgccaccgacgtggcttcgcgggggctccacatcgatggggtctcccacgtcatcaac
tatgacctcccccaggacgccgaggactacgtccaccgcatcggccgcacggcccgggca
ggtgccgagggtaaggccatctccatggccgacgaggacggagcgtttcaccttgaggcg
atccacgagtacatcaaggacaagatcccggtggagtgggccgaggatgatctcttcgtg
cacgacttcaagcgggtgaagccgcggcccaagggacaggagacccgtgccaagggtccc
acccgtcacggcaggaagcacccggaggccgagaagaaggagccggaaggggagaagaag
aaacggagccggccccgccgcaaaaagaatccggcggccggcgaggggggcacgcctccg
gccgcggagtag
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integrated database retrieval system