Geobacter sulfurreducens PCA: GSU0531
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Entry
GSU0531 CDS
T00155
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gsu
Geobacter sulfurreducens PCA
Pathway
gsu00300
Lysine biosynthesis
gsu00470
D-Amino acid metabolism
gsu01100
Metabolic pathways
gsu01110
Biosynthesis of secondary metabolites
gsu01120
Microbial metabolism in diverse environments
gsu01230
Biosynthesis of amino acids
Module
gsu_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GSU0531 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSU0531 (dapF)
Enzymes [BR:
gsu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GSU0531 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
RGM_C
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AAR33862
UniProt:
Q74FS5
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All DBs
Position
complement(564952..565800)
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AA seq
282 aa
AA seq
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MKFTKMHGAGNDYVYVNCFEETVGNPEQTAIKVSNRNFGIGSDGLILIMPSDKADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVTKKEITAETGAGVLTLQLFTGADGRVDRVRVN
MGKPRLTRAEIPMLGDPGDGQVVGQPLNILHTTFNITCVSMGNPHCVIFVDDVENFQVEK
YGPLIENHEMFPRRTNVEFVQIISRTEVRQRTWERGAGETLACGTGASAVCVAGALNGLT
EKNILNHLSGGDLELEWAEDGFLYMTGPATEVFSGEINLGTL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccaaaatgcatggggccggcaacgactacgtctatgtcaactgcttcgag
gagaccgtagggaaccctgagcagacggccatcaaggtttccaaccgcaacttcggcatc
ggctccgacgggctcatcctgatcatgccctccgacaaggccgacgtccggatgcgcatg
ttcaactccgacggatccgagtccgagatgtgcggcaacggcatccgctgcgtggccaag
tacgcctacgaccatggcatcgtgaccaagaaggagatcaccgctgaaaccggcgcgggc
gtcctgacgctccagctcttcaccggcgccgacggcagggttgaccgggtccgcgtcaac
atgggcaagccgcgcctcacccgtgcggaaattcccatgctgggcgacccgggcgacggc
caggtggtcggtcagcctctgaacatcctccacaccacgttcaacattacctgcgtttcc
atggggaacccccactgcgtcatctttgtggatgacgtggagaacttccaggtggaaaag
tacggccccctcatcgagaatcacgagatgttcccccgccgaaccaacgtggaattcgtc
cagatcatctcccgcaccgaggtacgccagaggacctgggagcggggagccggcgaaacg
ctggcttgcggcaccggcgccagcgccgtctgcgtggccggggctctcaacggcctcacc
gagaagaatatcctcaaccacctatccggcggcgacctggagctggagtgggccgaggac
ggcttcctctacatgaccggtccggccaccgaggtgttcagcggcgaaatcaatctcggc
acgctgtag
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