Geobacter sulfurreducens PCA: GSU0541
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Entry
GSU0541 CDS
T00155
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gsu
Geobacter sulfurreducens PCA
Pathway
gsu03030
DNA replication
gsu03410
Base excision repair
gsu03420
Nucleotide excision repair
gsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSU0541 (polA)
03410 Base excision repair
GSU0541 (polA)
03420 Nucleotide excision repair
GSU0541 (polA)
03440 Homologous recombination
GSU0541 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsu03032
]
GSU0541 (polA)
03400 DNA repair and recombination proteins [BR:
gsu03400
]
GSU0541 (polA)
Enzymes [BR:
gsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSU0541 (polA)
DNA replication proteins [BR:
gsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GSU0541 (polA)
DNA repair and recombination proteins [BR:
gsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GSU0541 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSU0541 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
ATP1G1_PLM_MAT8
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AAR33872
UniProt:
Q74FR5
LinkDB
All DBs
Position
572571..575246
Genome browser
AA seq
891 aa
AA seq
DB search
MATDTLFLIDGSSYIYRAYFAIRHLSSPAGFPTNALYGFTQMLLKVIKDHHPGRLAVVFD
KGRTTFRTEIYPDYKANRAAMPDDLVPQIGPIKEMVRAFSIPVLELEGYEADDIIGTIAR
RCEEQGLEAVVVTGDKDLMQIVSDRIRLLDTMKDRVSGIPEVVERFGVGPGQVIDILGLA
GDTSDNIPGVPGIGEKTATKLIQEFGSLDALLERAGEVKGKTGERLREFAEQARLSRRLA
TIVRDVPLDFDLDAFAVAPADNRRLAELFKEYGFTTLMKELTSEATLTTEHYRTIFAEAD
FRALLADLAGAGVFSVDLETTSLNPLEADIVGISLSFRDHEACYIPVGHAYDGAPAQLDR
TLVLEGLRPLLTDPAVRKVGQNLKYDYQVLRRHGIVMAGVWCDTMVASYLINPVRSGHGL
DSLAVEHLDHRMISYEEVAGKGKDQLNFARVPVEKASTYSCEDADAAWLLHRLFLPRVAE
AGMERLFFDLEMPLVPILAEMETAGVKLDLALLGELSAGLGSQLTALEEQVMALAPEPFN
LNSPKQLGEVLFEKMKLPAGKKTKTKTGWSTNVEELERLAEAGHEIAAAILRYRGLAKLK
STYTDALPRLVHPASGRVHTSYNQTVTNTGRLSSSEPNLQNIPVRTDEGRKIRRAFIAEE
GHLILSADYSQIELRVLAHLSEDRVFCDAFARDEDIHTRTAAEVFGLFPEMVTPEMRRQA
KAINFGVIYGQGAFSLAKQLGITTKVAKEFIDNYFARHPGARAFLDGCVAEAEARGYVTT
LMGRRLPIPDIASSNGNIRAFAQRNAVNYPIQGSAADIIKAAMVRVTERMRREGLTSRLI
MQVHDELVFEVPEGERTAMERLVQHEMEHAAPLRVPLRADVNVGRNWSEAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgacacgctgtttctcatcgacggctcctcgtacatctaccgggcctacttc
gccatcaggcatctgtcgtcgcccgcgggtttccccaccaatgcgctctacggcttcacc
cagatgctcctcaaggtcatcaaggatcaccatcccggccgcttggccgtggtcttcgac
aaggggcgcaccaccttccgcaccgagatctaccccgattacaaggcgaaccgggccgcc
atgcccgatgatctggttccccagatcggacccatcaaggagatggtccgggccttcagc
atcccggttctggagttggagggctacgaggccgacgacatcatcggcaccattgcccgg
cggtgcgaggagcagggtttggaggccgtggtcgtcaccggcgacaaggatctgatgcag
atcgtgagcgaccgcatccggctgctcgacaccatgaaggaccgggtgtccggcatcccc
gaggtggtggagcgcttcggcgtcggccccgggcaggtcatcgacatactgggcctggcg
ggcgacacctccgacaacatccccggcgtccccggcatcggcgaaaagaccgccaccaag
ctgatccaggagtttggctctctggacgccctgctggagcgggccggcgaggttaaggga
aagaccggcgagcgcctgcgcgagttcgcggagcaggcccggctttcccggcgtctcgcc
accattgtccgcgacgtgcccctggacttcgacctcgacgcctttgccgtggcccccgcc
gacaatcgccgattggccgaactcttcaaggaatatgggttcacgaccctcatgaaggag
ctgaccagcgaggccaccctgaccaccgagcactaccgcaccattttcgcggaggccgat
ttccgggccctgctcgccgacctggccggggccggggtcttttcggtggacctggaaacc
acgagcctcaatcctcttgaggcggacatcgtgggcatctccctgtcgttccgggatcac
gaagcctgctacatcccggtggggcacgcctatgacggcgccccggcccagctcgaccgc
accctggtgctggaggggctgcggccgctcctcaccgaccccgcggtgcgcaaggtgggg
cagaacctcaagtacgactaccaggtgctgcgccgtcacggcatcgtcatggccggggtc
tggtgcgataccatggtcgcctcctatctgatcaacccggtccggtcgggccacggcctg
gactccctggcggtggagcacctggaccaccggatgatctcctacgaggaggtggccggg
aagggaaaggaccagctgaactttgcccgggtgccggtggaaaaggcgtccacctattcc
tgcgaggatgccgacgccgcctggctcctgcaccggctgttcctgccccgggtggccgag
gccggcatggagcgcctgttcttcgatctggagatgccgctcgtaccgatcctggccgag
atggaaacggccggggtcaagctggacctggcgctgctgggggaactctccgccgggctc
ggcagccagttgacggctctggaggagcaggtcatggcgctcgcgcccgagccgttcaac
ctcaactcgcccaagcagctgggagaggtgctgttcgagaaaatgaagctcccagccggg
aaaaagaccaagaccaaaaccggctggtccaccaacgtggaggagctggaacggctggcc
gaggccgggcacgagatcgccgcggccatcctccggtaccgggggctcgccaagctcaag
tccacctacaccgatgccctgcccaggctggtgcacccggccagcgggagggtgcacacc
tcctacaaccagaccgtcaccaacaccgggcggctctcgtcctcggagcccaacctgcag
aacatcccggtccgcaccgacgaggggcggaagatccggcgcgccttcatcgcggaggag
ggccacctgatcctctcggccgactactcccagatcgagctgcgggtcctggcccatctc
tcggaggaccgggtcttctgcgacgcctttgcccgggacgaggacatccacacccggacc
gcggccgaggtgttcggcctcttcccggagatggtgacgcccgagatgaggcgccaggcc
aaggccatcaacttcggggtcatctacggacagggggccttcagtctggccaagcaactg
gggatcaccaccaaggtggccaaggagttcatcgacaactacttcgcccgccatcctggc
gcccgggccttcctggacggctgcgtggccgaggccgaggccaggggctacgtgaccacc
ctcatggggcggcggctccccattccggacatcgccagcagcaacggcaacatccgggcc
tttgcccagcgcaacgccgtcaactaccccattcagggctcggccgcggacatcatcaag
gcggccatggtgcgggtcacggagcggatgcggcgagaggggctcaccagtcgcctgatc
atgcaggtccacgacgaactggtcttcgaggtgccggagggcgaacggaccgccatggag
cggctcgtgcaacacgagatggagcatgctgcccccctccgggtgccgctgcgggcggac
gtgaacgtggggcgtaactggagcgaggcccactga
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