Geobacter sulfurreducens PCA: GSU1122
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Entry
GSU1122 CDS
T00155
Symbol
yhaM
Name
(GenBank) 3'-to-5' exonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gsu
Geobacter sulfurreducens PCA
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsu03019
]
GSU1122 (yhaM)
Messenger RNA biogenesis [BR:
gsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSU1122 (yhaM)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
AAR34448
UniProt:
Q74E42
LinkDB
All DBs
Position
1206507..1207634
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AA seq
375 aa
AA seq
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MSKIFIASIHDRDLVDSVFLVKEKIMAMAKNGKPYMTLRLMDKSGEIEGRVWDNVDQLSA
SFDKDDFVGVRSKASVYLGKMQLIISELVRVPEDRVNLADFLPESDRSIAEMESELKALV
ETFSDQHLKALMKAFFDDSSFMELYRTAPAAKGMHHVYLGGLLEHSLAVSRLVDAIVPLY
ADLNRDLLVAGALLHDVGKVREMTYLRSFDYTDEGKLIGHITIGVEMLQERISTIPGFPP
ELGMLLKHMLLSHHGQYEYGSPKRPKTVEATILNYLDDLDSKINGIRTHIRKESENLGRW
TSYHRLYDRYFYKESYSGEEEYREGADELMVLEPEPVSLPAAPRAAEAERKSGNTARKGF
SNNPFETLQKNLDLF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaagattttcatagcgagcatccatgaccgcgatctggtcgattccgtgtttctc
gtgaaggaaaagatcatggccatggccaagaacggcaagccctacatgacgcttcggctc
atggacaaaagcggcgagatagaggggcgtgtctgggacaacgttgaccagctgtcggcc
tccttcgataaggacgacttcgttggcgtccgctccaaggcatcggtctacctgggcaaa
atgcagcttatcatttccgagctggtgcgggttcccgaagacagggtcaacctggcggac
tttctccccgaatcggaccgctccattgccgagatggagagcgagctcaaggccctggtg
gaaaccttttccgatcagcacctgaaagcgctgatgaaggcctttttcgacgattcttcc
ttcatggagctctaccggaccgcgccggccgccaaggggatgcaccacgtctatctgggt
ggactgctggagcactcactggccgtgtcccgcctggttgacgccatcgtccccctctac
gcggatctcaaccgcgatctgctggtggcgggtgccctgttgcacgacgtgggcaaggtg
cgggagatgacgtacctgcgttccttcgactacaccgacgaggggaaactcatcggccat
atcaccatcggcgtggagatgctccaggagcggatttcgaccattcccggcttcccgccg
gagctggggatgctgctcaagcacatgctgctgtcccaccatggtcagtacgaatacggt
tcccccaagcgccccaagactgtcgaggcaacgattctcaactacctggacgatctggac
tccaagatcaacgggatcaggacccatatccgcaaggaaagcgaaaacctggggcgctgg
acctcctatcaccggctctatgaccgctacttctacaaggagagctacagcggcgaggag
gaataccgggaaggggcggatgagctcatggtgctcgagccggagccggtatcgctgccg
gctgcccctcgggccgcggaggccgagcgcaaaagcggcaacaccgcccgaaaggggttc
agcaacaatccgttcgagaccctgcaaaagaatctggatctgttctga
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