Geobacter sulfurreducens PCA: GSU2073
Help
Entry
GSU2073 CDS
T00155
Name
(GenBank) dystroglycan-type cadherin-like domain repeat protein
Organism
gsu
Geobacter sulfurreducens PCA
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
Ig_SIBA-E_2nd
MBG_3
Cadherin_4
PKD
Cadherin_5
Y_Y_Y
PKD_4
Ig_CFAP65_4th
EF-hand_6
EF-hand_1
Dockerin_1
Big_13
EF-hand_5
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
AAR35449
UniProt:
Q74BG8
LinkDB
All DBs
Position
complement(2273506..2278845)
Genome browser
AA seq
1779 aa
AA seq
DB search
MKTLASLCRAVAVAVLVGLGIASGVVEAADWTLSSRNSTVNFEDASTYGVYGWTIDGKQI
VSQLGFYCRVGTSGPEYPLISNDVDAEGMFTVTRPANQADPAALALVYTSLDGTYSVEVA
YRLTGGATGSKRSTLKRVITIKNLRGSPLDFHFYAYSDYDLSLPFSNDNVAIVGKRAFQS
GFTSTSDKNGNGYSVVQSSTLSPSRYGVDMTQFIGLLANGSTPYNLDNFGGPYTNTNADV
QFAIQWDLAIPANGSVSFEIADEAYPSKPLFLAKTHPGQCAAYAQPLTYTYTYDNTVNTI
DLHNLLISDKLPAGIDFVSATNGGEYKADTREIVWSLPLLAKGAGQQTFQATVLYNSPRD
IAANTANNLTMGLSDETYPRYVQDTIALCNHPPQISSVPATVASASALYTYQVRASDADA
GTVLTYSFDAAPSGMSISSAGLVQWTPTNSQTGTFPVTVRVSDGQLAATQSFSVAVAPAN
RPPVIASSPVTAAVVGQLYSYTVSATDPDGDTLYYSISAPTGKTLPTGMAMGMTTGTLTW
TPSSSTPANWDVIVAVTDTKFNRTTQSFTITVTDGKVNQAPLIASSPVTSATEGALYSYQ
VVASDPNGDSLTYALTTAPSGMSIAANGTISWTPLASQAGAHTVVVTVSDGALSATQTFT
VTVTKLNRAPGITSTAVTSVSEGAAYGYAVSASDPDGDALTYSLTASPPGMTISPAGLIS
WNPGYTDAGSYTVTVKVSDPAGLFATQTYTLLVTDTNRAPVVTMPADQSTPEGTAVNLHI
KASDADNNTLAYSATGLPPGLSINSSSGVITGTLGYTAAGIYSVRVMVGDGITSSSVSFS
WTVTDVNRAPGVIAPANRTNVEGTVVNLTVAGTDPDGDALTYSATGLPAGLAINASTGAI
TGTIDYSAAAGSPYTVTVTATDPSNAKGSASFTWTVTAYVKQTPSISWATPGAITYGTAL
GGTQLNATASVPGTFVYTPAAGTVLNAGTRTLSVVFTPSDPNAYTSASATVSLTVDKAVA
SVSLTGLSATYDGTPKAVAASTIPPGLGINLTYAGGSSAPTAAGSYPVVATVTDANYSGS
ATGTLAIARAVPAISWAEPAAVYAGTVLGSNQLNATADVAGSFSYNPAAGTVLSTAGPVT
LTATFTPADAVNYTTATRSVSITVTMAPQQPPAVIKPADQTSDKDVMVNLQIQAIDADGD
ALTYSASGLPTGLSINSATGLISGIPTTVGTYTITVSVTDGTATTRTTFTWMVIIPPTAP
VVTKPADQASPENGSVSLQIQATDVNGDGLTYSAAGLPPGLTMNSKTGLISGNIPYCSAG
TYPVTIMAKDPGNLSGSTMFSWVVTKTNVAPIVIKPANQSSPLNNGVSLQIQATDQNCGD
SLIYSASDLPSGLAINSGSGLISGTATVAGAYNVVVTVGDGMTTSSTTFSWTVNSQVVNE
PPVIISSPILIAEKEKAYRYDVNAVDPNNDALTYRLIQRPSRMTISSSTGLISWTPQDTG
SYTVTVEVADAKGLKATQSYTLRVITSNSAPTVTNPGNQTSWEEKPVNLQIRASDSNGDK
IFYSATGLPAGLSINESTGLISGTTAAGAAAAGPFTVTVTVSDGSASTSTVFAWTVIPAV
VNLPPVVTSAPATAAIRNKIYRYDVNTTDPNGDTVTYKLVTRPSGMSISSSTGLIQWTPK
DTGTYPVKVEVSDAKGLKAYQSFTVTVYRRSSDVPAGAVIGFSAQSIMDAFDANGNGVVT
PGDFMQILRRGEAGSILPDSNGNGRIDGHDIRTYLGEML
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactctagcaagtttgtgcagggcggtcgcggtggctgtgctggtggggctcggc
attgcctccggtgtcgtggaggctgccgattggactctgtccagccggaattccacggtg
aatttcgaagatgcctccacctacggcgtatacggctggacgatcgacggcaagcagata
gtgagccagttgggcttctactgccgtgtcgggacctccgggcccgagtatccgctgata
tccaatgacgttgacgccgaaggcatgttcaccgtcacgcgtccggcgaaccaggcggac
cctgcggcgcttgcccttgtctatacctccctggacggcacctattccgttgaagttgcc
tatcgccttacgggtggcgcgacggggagcaaaaggtccaccctgaaacgagtcatcacg
atcaagaaccttagaggttcccctcttgacttccatttctatgcctactccgattacgac
ctgagtcttcccttcagtaacgacaacgtggccatcgtggggaaaagggccttccagtcc
ggcttcacgagtaccagcgacaagaacggcaacggctacagcgtggttcagtcgtcaacc
ctttcgcccagcagatacggcgtcgacatgactcagttcatcggcctcctcgccaatggc
tccactccttacaatctcgataatttcggcggcccgtacaccaataccaatgcggacgtt
cagtttgcgatccagtgggacctggcgatccccgcgaacggctccgtctccttcgagatt
gccgacgaggcgtacccctcgaagcccctgttccttgccaagacccatcccggccagtgc
gcggcatacgctcagccgctcacctacacctatacctacgacaacacggtcaataccatc
gatctacacaaccttctgatttcagacaagctacccgccggcattgactttgtctccgca
accaacgggggagagtacaaggcggacacgcgggagattgtctggagtttgcccctgctc
gccaaaggcgccgggcagcagacgttccaggcaacggtcctgtacaattcgccccgtgac
atcgcggcaaacacggccaacaacctgaccatgggattgagcgatgaaacctatccccgc
tatgtgcaggatacgatcgcgctctgcaaccatccgccgcagatttcctcagtgcccgca
accgttgcgtccgcgtccgccctttacacgtaccaggtgcgcgcctccgacgccgatgcc
ggcacggtactgacctactcctttgacgccgcgccgtcgggcatgtcaatcagctcggcc
ggccttgtccagtggacccccacgaacagccagaccggaaccttcccggtaaccgtgcgg
gtgagcgacggtcagctcgccgctacccagagcttctcggtcgccgtggctccggccaac
aggccgccggtcattgcatcgagtcccgtgacagccgccgttgtggggcaactctactct
tacaccgtctccgccacggacccggacggggacacgctctactacagcatcagcgcgccc
acgggcaaaacgcttcccaccggcatggcaatgggcatgaccaccggcaccctcacctgg
acaccctcaagctcgacaccggccaactgggatgtcatcgtggcggtgactgatacgaag
ttcaacaggacaacccagagcttcaccattacggtcactgacggcaaggtcaaccaagct
ccgttgatcgcttcctcgccggtgacgagcgccacggaaggagccctgtacagttatcag
gtggtggcgagcgatcccaacggcgactccctcacctatgcactcaccactgcgccctcg
ggcatgtcgattgccgcgaacggcaccatctcctggactcctctcgcatcccaggccggc
gcacatacggttgtcgtaacggtaagcgacggggcgctctccgccacccagacctttacg
gtaacggtaacgaagctcaatcgtgcgccgggcatcacgtcaactgccgtcacctcggta
agcgagggtgccgcgtacggatacgccgtctccgccagcgacccggacggcgacgctctt
acctacagtctgacagcatcccccccgggcatgacgatctcgccggccgggctcatctct
tggaatcctggttataccgatgccggcagctatactgtgacggtaaaggtgagcgatccg
gctggcctctttgccactcagacctacacgctgctggtgaccgacacgaacagggctccg
gtggtaacaatgccggctgaccagtctacccccgaggggacggcggtcaatctccatatc
aaggcgtccgatgcggacaacaacacccttgcctacagtgccacgggacttcctccgggg
cttagcatcaattcatcttccggagtcatcaccggcaccctgggttacacggctgccggc
atctactctgtaagagttatggttggtgatgggataaccagcagcagcgtgagtttttcc
tggaccgtgaccgacgtgaaccgtgcgccgggtgtcatcgctccggcgaaccgcacgaat
gttgaggggacggtcgtcaaccttaccgtcgccggcaccgaccctgatggtgacgctctt
acctacagtgccacgggcctgcctgcgggccttgccatcaacgcttctacgggtgccatt
accggaaccattgactacagcgccgccgccggcagcccctacaccgtcaccgtcaccgcc
accgacccctccaacgccaaaggaagcgcaagttttacctggaccgtgacggcctatgtc
aagcagaccccgagcatcagttgggcgactcctggtgccatcacctacgggacagctctc
ggcggcacccagctcaacgccacggcgagcgtgcccggcaccttcgtgtacacccctgcc
gccggcactgtcctcaacgccgggacccggaccctgtcggtggttttcaccccgagcgac
ccgaacgcatacaccagcgccagcgccaccgtcagcctgacggttgacaaggccgttgcc
tccgtatcgctcaccggcctgagcgccacctatgacggcacgccaaaggccgttgccgcc
agcacgatcccgcctggcctcggcatcaacctcacctatgccgggggcagcagcgcgccg
acagccgccgggagctaccccgtcgtcgccacggtcaccgatgccaactacagcggcagc
gccacgggaacactcgcaatcgcccgtgccgttcccgccatcagttgggccgagccggca
gcggtctatgcgggcacggtcctcgggtcgaaccagctcaacgccactgccgacgtagca
ggcagcttcagctacaatcccgcagccggcaccgttctctccactgcgggcccggtcacc
ctgacggccaccttcacgcccgccgatgccgtcaactacaccacggccaccaggagcgtg
agcatcaccgtcactatggcgcctcagcagcctccagccgttataaagcctgcggaccag
accagcgacaaggacgtaatggtcaacctccagatccaggcgatcgacgcagatggcgat
gccctcacctacagtgcctctgggctgccgacaggtctcagcatcaacagtgctacaggt
ctcatcagcggcatccccaccactgtgggaacctacacgataaccgtttccgtgaccgat
ggaacggctacgaccagaacgacctttacctggatggtcatcataccgccgactgctccg
gtggtaaccaagcccgccgatcaggccagtcccgagaatggcagcgtcagcctccaaatc
caggccaccgatgtcaacggagacggcctcacctacagtgccgccggcctgccgccgggc
ctcaccatgaacagcaaaaccggcctgatcagcggtaacataccttattgcagcgccggt
acctaccctgtgaccataatggccaaggacccgggtaacctcagcggcagtaccatgttc
tcatgggtggtaaccaaaaccaacgtcgcgccgatagtgatcaagcctgccaaccagagc
agtcccctgaacaatggcgtgagtctgcagatccaggccactgaccagaattgcggcgac
agcctcatttacagtgcctcggaccttccctccggccttgccatcaactccggttcgggt
ctcatcagtggcaccgccaccgtcgccggggcgtacaatgtcgttgtcaccgtgggagac
ggcatgacgacgtcaagtacaacattcagttggaccgtgaacagtcaggtcgtcaacgag
ccgccggtgatcatttcctccccgatcctgatcgcggaaaaggagaaggcgtaccgctac
gacgtcaacgccgttgatcccaataacgatgcgctgacttaccggctcatccaacgcccc
tcgcgtatgaccatcagttcttccactggcctcatttcgtggacgccccaagatactggc
agctacacggtaacggtagaggtggcggatgcgaagggactgaaggcaacccagagctat
acgctgcgggtcataaccagcaacagcgctccaacagttacgaatcccggcaatcagacg
tcatgggaagagaaaccggttaatctccagatcagagccagcgacagcaacggcgacaag
atcttctacagtgccacgggccttcccgccggtctcagcatcaacgagtccaccgggctc
atcagcggcaccactgctgccggagcagcggcagctgggccctttaccgtgaccgtgacc
gtaagtgacgggtccgcctcgacgagtaccgtctttgcttggacagtgatccctgcagtc
gtcaacctgccgccggtcgtcacttctgccccggccacagcggcgattcgcaataagatc
tatcggtacgacgtaaacacaacggaccccaacggcgataccgttacctacaagctggtg
acacgcccttcggggatgagcatcagttcctcgaccggactcatccagtggactccgaag
gatacgggtacctatccggtcaaggtcgaagtgtccgacgccaaggggctgaaggcatac
cagtccttcaccgtgacagtgtatcgcaggagttccgatgttcccgcgggcgcggtcatc
ggcttcagtgcccaatcgattatggatgcctttgacgcaaacggtaatggtgtggtgacg
cccggcgacttcatgcagatactcagaaggggggaagccggttccatccttccggatagt
aacggcaacggcaggattgacggccacgacatccggacatatctgggcgagatgctctga
DBGET
integrated database retrieval system
