Geobacter sulfurreducens PCA: GSU2207
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Entry
GSU2207 CDS
T00155
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gsu
Geobacter sulfurreducens PCA
Pathway
gsu03030
DNA replication
gsu03430
Mismatch repair
gsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSU2207 (holA)
03430 Mismatch repair
GSU2207 (holA)
03440 Homologous recombination
GSU2207 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsu03032
]
GSU2207 (holA)
03400 DNA repair and recombination proteins [BR:
gsu03400
]
GSU2207 (holA)
Enzymes [BR:
gsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSU2207 (holA)
DNA replication proteins [BR:
gsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GSU2207 (holA)
DNA repair and recombination proteins [BR:
gsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GSU2207 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
CPSase_L_D3
DNA_pol3_gamma3
DUF222
Motif
Other DBs
NCBI-ProteinID:
AAR35583
UniProt:
Q74AZ2
LinkDB
All DBs
Position
complement(2421374..2422387)
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AA seq
337 aa
AA seq
DB search
MKSDELDNAIERGEIAPLYYFYGDEPYLMERAVKRLTERVVSADFRDFNLDVFYGNESKG
DDIATAAQTLPMFADRRMVLVKRAGDLSAAALETLAACVADPAPQTCLLFVGDKIDKRKK
FFLDLAKKGELVEFKRPYENQLGVFIRDEARSLGKRIDGAAVEMLVYLVGNNLGELATQL
EKVATFVGTRETLTVEDVREVVSDTKVESVFDLANALGERDLGKSLRSLATILRDGEAPL
MLLAMIARHFRQLWRVRELMAAKVQQQEVARRTGINPYFLKGVMDQARNFTVADLRRVFE
GLYAADLALKGVGGGGKPSLVMERLVMDVCGMGRRKR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgacgaactggataacgccattgaaaggggggagattgcccccctttactat
ttttacggagacgagccctatctgatggagcgggccgtcaagcgtctcacggaacgggtc
gtgtcggcggatttccgcgatttcaacctggacgtattctacggcaacgagagcaagggg
gatgatatcgccactgccgcccagaccctgcccatgttcgccgaccgccgcatggtgctc
gtcaagcgggccggcgatctgtcggccgctgctctcgaaacccttgccgcctgcgttgcc
gatcccgctccccagacctgtctcctctttgtgggcgacaagatcgacaagcggaagaag
tttttcctggatctggcaaaaaagggagaactggtcgagttcaagcgtccctacgagaac
cagctcggcgtattcatccgtgacgaggcccggagtctcggcaagcggatcgacggcgct
gccgttgaaatgctcgtctatctcgtggggaacaatctgggggaactggcgacccagctg
gaaaaggtggccacctttgtgggtacgagggagacgctcacggtagaggatgtgcgggaa
gtggtatccgataccaaggtggaaagcgttttcgacctggccaacgctctgggagagcgt
gatctgggcaagtctctgcggagcctggccactattttgcgggacggcgaggccccactc
atgcttctggccatgatagcgcggcatttccgccagctctggcgggtgcgcgagctcatg
gccgccaaggtccagcaacaggaggtcgcccgcagaaccggcatcaatccctacttcctc
aagggggtcatggatcaggcccgcaacttcaccgtggcagacctgcgccgggtcttcgag
gggctctatgcagccgatctcgccctcaagggagtcggtggcggcggaaaaccttcgctg
gtcatggaacggctggtgatggacgtgtgcgggatgggacggcggaagaggtaa
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