Geobacter sulfurreducens PCA: GSU3132
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Entry
GSU3132 CDS
T00155
Symbol
hup
Name
(GenBank) histone-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
gsu
Geobacter sulfurreducens PCA
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsu03032
]
GSU3132 (hup)
03036 Chromosome and associated proteins [BR:
gsu03036
]
GSU3132 (hup)
03400 DNA repair and recombination proteins [BR:
gsu03400
]
GSU3132 (hup)
DNA replication proteins [BR:
gsu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GSU3132 (hup)
Chromosome and associated proteins [BR:
gsu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GSU3132 (hup)
DNA repair and recombination proteins [BR:
gsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GSU3132 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AAR36523
UniProt:
Q747Y3
LinkDB
All DBs
Position
complement(3435199..3435483)
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AA seq
94 aa
AA seq
DB search
MTKAELVDAVAKSANLTKAAADKAVGAVISAVSDALKKGDKVTLVGFGSFEVSTRKARTG
RNPQTGKEIKIAAAKVPKFRPGKALKDAVAGKKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagctgaacttgtggatgccgtagcgaaatctgccaacctgaccaaggcggcc
gcagacaaggccgttggcgccgttatcagcgccgtcagcgacgcccttaagaagggtgac
aaagtgaccctggtcggtttcggtagcttcgaggtgtccacccgcaaggcgcgcaccggc
cgtaacccccagaccggcaaggagatcaagatcgctgccgccaaggttcccaagttccgt
ccgggcaaggccctcaaggacgcggttgccggcaagaagaagtag
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