Geobacter sulfurreducens PCA: GSU3239
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Entry
GSU3239 CDS
T00155
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
gsu
Geobacter sulfurreducens PCA
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsu03019
]
GSU3239 (cafA)
03009 Ribosome biogenesis [BR:
gsu03009
]
GSU3239 (cafA)
Messenger RNA biogenesis [BR:
gsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSU3239 (cafA)
Ribosome biogenesis [BR:
gsu03009
]
Prokaryotic type
rRNA processing factors
GSU3239 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Antiterm
DUF5351
Motif
Other DBs
NCBI-ProteinID:
AAR36630
UniProt:
Q747M6
LinkDB
All DBs
Position
complement(3551663..3553165)
Genome browser
AA seq
500 aa
AA seq
DB search
MANELVINTSSHETRIALIENGTIAELYIERSREKGIVGNIYKGRVVRVLPGMQAAFVDI
GLEKAAFLYVADVFDAMEEFETFMEVNGEESDSERQVLHPLHPIEELLQEGQEILVQVSK
EPIGTKGARITSHVSLPGRHLVYMPTVDHVGVSRRIEDEPERERLKEIVGKAKPAGGGFI
VRTAAEGKTEEDLVADMNYLTKLWEEVVRRNEKAHAPCLIHADLDVTQKVIRDILTENVS
RIVVDSRHEHDKIVQFISTFMPKMKYSMELYDDEEPIFDHFGLEVEISRALGRKVWLKSG
GYIIIEQTEALTAIDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFI
DMEKEVNREKVFTALEEAMKADKSKTNILKISDLGLVEMTRKRVRESIGRMMCEPCPYCE
GRGYVKSKTTVCHEIFRELRREMLDIRGSKVMLTVHPQVADLLYDEERRGLEELEKKFKK
RITVRAKPGFHQEQFEIAIS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgaactggtgatcaacacctcgtcccacgagacccgcatcgctctcatcgag
aacggcaccattgccgagctctacattgagcggagccgcgaaaaggggatcgtcggcaac
atctacaaggggagggtcgtacgcgtccttcccggcatgcaggcggcatttgtcgacatc
ggcctggagaaggcggcttttctctacgtggccgatgtgttcgatgccatggaggagttc
gagaccttcatggaggtgaacggcgaggagagcgacagtgaacggcaggttcttcacccg
ctccaccccatcgaagaactccttcaggaagggcaggaaattctggttcaggtgtccaag
gaacccatcggcaccaagggggcccgtatcacctctcatgtgtcgctgcctggccgccac
ctggtctacatgccgacggtggaccacgtgggagtgtctcggcggatcgaagatgagccg
gagcgcgagcggcttaaggaaatcgtgggcaaggcgaagccggccgggggcgggttcatc
gttcggaccgccgccgagggcaagaccgaggaggatctggtcgccgacatgaactacctg
acgaagctctgggaagaggttgtcagacgcaacgaaaaggctcatgccccctgtctcatt
catgccgacctggacgtgacccagaaggtcatccgtgacatcctcaccgaaaacgtttcc
cgcatcgtggtcgactcccggcacgagcacgacaagatcgtccagttcatctccaccttc
atgccgaaaatgaagtactccatggagctctacgacgacgaggagcccatctttgatcac
ttcgggctggaggtggagatcagccgggcactgggacgcaaggtctggctcaagagcggc
ggctatatcatcatcgagcagaccgaggcccttaccgccatcgatgtcaacaccggccgg
ttcgtgggcaaacacaacctggaggacaccatcctcaagaccaacctggaggcggttaag
gagatcgcctaccagctcaggctgcgcaatatcggcgggatcatcatcatcgacttcatc
gacatggagaaggaggtcaaccgggagaaggtctttacggcgctggaggaggccatgaag
gccgacaagtccaagaccaacatcctgaagatctcggatctgggcctggtggagatgacc
cggaagcgggtgcgggagtctatcggcaggatgatgtgcgagccctgcccctactgcgag
gggagagggtacgtgaagtccaagacaacggtctgtcacgagatattccgcgaactgcgc
cgggagatgctcgatattcgcggcagcaaggtaatgctcaccgtgcatccccaggtggcc
gatctcctctacgacgaggagcggcgagggttggaggagttggagaagaagttcaagaag
cggattacggtccgggccaagcccggttttcatcaggagcagttcgagatcgccatcagc
tga
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