Geobacter sulfurreducens PCA: GSU3325
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Entry
GSU3325 CDS
T00155
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
gsu
Geobacter sulfurreducens PCA
Pathway
gsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSU3325 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsu03400
]
GSU3325 (uvrA)
DNA repair and recombination proteins [BR:
gsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSU3325 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GSU3325 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
AAA_21
AAA_25
AAA_16
nSTAND3
AAA_18
DnaJ_CXXCXGXG
AAA_14
ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAR36715
UniProt:
Q747E2
LinkDB
All DBs
Position
3652835..3655648
Genome browser
AA seq
937 aa
AA seq
DB search
MAHDTIIVKGACEHNLKCIDVEIPRDKLVVITGISGSGKSTLAFDTIYAEGQRRYVESLS
AYARQFLEQMEKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCYECGKPITSQTVSQMVDQIMALPAGTRLQLLSPMVRGRKGEYRKELAQLRKDGFARVI
VDGVQHELAEEIHLDKNKKHDIDIVVDRLIIKEGIERRLADSLETALNHAEGVVKVQVVD
GDTILFSEALACIDCGISYPEMTPRMFSFNNPYGACPDCTGLGTRMYFDEELVVPNPELS
IREGAIAPWEKRLSAWYHMTLDALAKAFDFDIRTPFKELSPRVREVILRGSKGEKVEFWW
EEDGGRRHTYTKEFEGVIPNLERRYRESDSEQVREELERYMNVMPCPTCQGARLKREALH
VKVAERDIRQVTALSIKDALEFFASLTLTPKEEEIARRILKEIRERLHFLVNVGLDYLSL
DRTSGTLSGGEGQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNGRLLQTLKHLRDIGNT
VLVVEHDEETILEADHVLDMGPGAGEHGGRVVAQGTPAEIMANPESLTGRYLSGELTIAV
PKKRRKPKRFITVEGAAENNLKDVTVDIPLGVMTCVTGVSGSGKSTLVIDTLYKVLGQRL
YRSRERAGAVRDIRGLEQLDKVINIDQSPIGRTPRSNPATYTGVFADIRDLFAQLPESKV
RGYKPGRYSFNVKGGRCEACAGDGIIKIEMHFLPDVYVQCEVCKGARYNRETLEVTYKGK
SIAQVLDMTVSEALRFLENIPKVKAKLQTLEEVGLGYIRLGQSATTLSGGEAQRVKLAKE
LARRATGRTIYILDEPTTGLHFHDIAKLLEVLRKLVEGGNTIVIIEHNLDVIKTADYIID
LGPEGGDRGGEVIATGTPEEVAKVTRSYTGQYLRKML
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgacaccatcatcgtcaaaggcgcgtgcgaacataacctcaagtgcatcgac
gtggagatccctcgggacaagctcgtcgtcatcaccggcatttccgggtcgggaaaatcg
accctggccttcgataccatctatgccgaagggcagcgccgctacgtggaatccctctcg
gcctatgcccgccagtttctggagcagatggagaagcccgacgtggaatccattgagggg
ctttcccctgccatctccatcgaacagaagaccaccagccgcaacccccgctccaccgtg
ggaaccgtcaccgagatctacgactaccttcggctcctcttcgcccgcgtcggccacccc
cactgctatgaatgcggcaaaccgatcacctcccagactgtctcccagatggtggaccag
atcatggccttgcccgccggaaccaggcttcagcttctctcgcccatggtccggggtcgc
aagggggagtaccgcaaggaactggcccagttgcgcaaggacggcttcgcccgggtcatc
gtggatggcgtgcagcatgagctggccgaggagattcacctcgacaaaaacaagaaacac
gatatcgatatcgtggtggatcgactcattatcaaggagggaatcgagcggcgcctggcc
gactccctggaaacggccctgaaccacgcggaaggggtggtaaaggtccaggtcgtggac
ggcgacaccatccttttctccgaggcactggcctgcatcgactgcggcatctcctacccc
gagatgaccccccggatgttctcattcaacaacccctacggcgcctgccccgactgcacc
ggcctcggcacgcggatgtacttcgacgaggaactggtcgtgccgaacccggaactctcc
atccgcgaaggagccatcgccccatgggagaaacggctctcggcctggtaccacatgact
ctggacgccctggccaaggcctttgacttcgacatccggacccccttcaaagagctctct
ccccgggtgcgcgaggtgatcctgcgcggatccaaaggcgaaaaagttgagttctggtgg
gaagaggacggtgggcggcgtcacacctacaccaaggaattcgaaggggtcatccccaat
ctggagcggcgctaccgggaaagcgactcggagcaggtgcgggaagagctggagcgctac
atgaacgtaatgccctgccccacctgccagggggcgcgcctgaagcgcgaggcccttcac
gtgaaggtggcggagcgggacatccgtcaggtaaccgctctctccatcaaggacgccttg
gagtttttcgcctccctcacgctcaccccgaaagaggaggagatcgcccgccgcatcctg
aaagaaatcagggagcggctccacttcctagttaacgtgggactcgactacctgtccctg
gaccggacctcgggcaccctctccggcggtgaagggcagcggatccggctcgccacccag
atcggctccagcctcgtgggggttctctacatcctggacgagccctccatcggcctgcac
cagcgggacaacggccgactgttgcagaccctcaagcacctgcgcgacatcggcaacacg
gtgctggtggtggagcacgacgaggagacgatcctggaggcggaccacgtgctcgacatg
gggcccggcgccggtgagcacgggggccgcgtggtggcccagggaaccccggcggagatc
atggcgaaccccgagtccctcacgggccgctatctctcaggagagctcaccatcgccgtg
cctaaaaagcggcgcaagcccaagcgcttcatcaccgtggagggagccgcggaaaacaac
ctgaaggatgtcaccgtcgacatccccctcggtgtcatgacctgcgtcaccggggtgtcc
gggtcgggcaaatcgacactcgtgatcgacaccctctacaaagtcctgggccagcggctc
taccggagccgggagcgggccggcgcagtacgcgacatccggggactggaacaactggac
aaggtcatcaacatcgaccagtcgcccatcggccgcacgccgcgctcgaaccccgccacc
tacaccggggtcttcgccgatatccgggatctcttcgcccaactccccgaatccaaggtg
cggggctataagccggggcgctactcgttcaacgtgaaggggggacggtgcgaggcctgc
gccggggacgggatcatcaagatcgagatgcactttctccccgatgtctacgtccagtgt
gaggtctgcaagggagcccgctataaccgcgagaccctggaggttacctacaaggggaaa
tccatcgcgcaggtcctggacatgaccgtttcggaggccctgcgcttcctggagaacatc
ccgaaggtcaaggcaaagctccagaccctggaggaggtggggctcggctacatccgcctg
ggccaatcggccacgaccctatccggcggcgaggcccagcgggtgaaactggccaaggaa
ctggcgcgccgggccaccggccgaaccatctacatcctcgacgagcccaccaccggcctt
cacttccacgacatcgccaagctcctggaggtgctaagaaaactggtggaggggggaaat
accatcgtcatcatcgagcacaacctggacgtcatcaagaccgccgattacatcatcgac
ctgggccccgaagggggcgaccggggcggcgaggtgatcgccaccggcacacctgaggag
gtggccaaggtgacacggtcctacacgggacagtatttgcggaagatgctgtga
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integrated database retrieval system
