Geomonas subterranea: KP001_00790
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Entry
KP001_00790 CDS
T07936
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsub03032
]
KP001_00790
03036 Chromosome and associated proteins [BR:
gsub03036
]
KP001_00790
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_00790
DNA replication proteins [BR:
gsub03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KP001_00790
Chromosome and associated proteins [BR:
gsub03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KP001_00790
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KP001_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QXE91112
LinkDB
All DBs
Position
187580..187855
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAELVGAIAEEAQLTKVDADKALSGILDALTNCLADGDKVTLVGFGTFSVAERAARTG
QNPQTGKKIEIAASIAPKFKPGNTLKALING
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctggtaggcgcaattgccgaagaagcacagttgacgaaggttgat
gctgacaaggccctctccgggattctcgacgcactcaccaactgcctcgccgacggcgac
aaggtgaccctggtcggcttcggtaccttcagcgtcgcggagcgcgccgctcgcaccggt
cagaatccgcagaccgggaagaagatcgagatcgccgcttcgatcgccccgaaattcaag
ccgggcaacacgctgaaggcattgatcaacggttaa
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