Geomonas subterranea: KP001_00890
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Entry
KP001_00890 CDS
T07936
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00250
Alanine, aspartate and glutamate metabolism
gsub00310
Lysine degradation
gsub00350
Tyrosine metabolism
gsub00650
Butanoate metabolism
gsub00760
Nicotinate and nicotinamide metabolism
gsub01100
Metabolic pathways
gsub01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KP001_00890 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KP001_00890 (gabD)
00310 Lysine degradation
KP001_00890 (gabD)
00350 Tyrosine metabolism
KP001_00890 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KP001_00890 (gabD)
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KP001_00890 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KP001_00890 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KP001_00890 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
QXE91127
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Position
204617..206074
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AA seq
485 aa
AA seq
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MLVLKDSGLFQQRCFINGAWTGADSGETIDVTNPATGESLGSIPKMGSAETRRAIEAAQA
ALPGWRAKTAQERAVIIRRWSELLVVHQDDLAVLMTAEQGKPLAEARGETVYAASFLEWF
AEEGKRIYGDVIPAPQSDKRIVVLKEPVGVCVAITPWNFPSAMITRKVAPALAAGCTMVV
KPATATPYSALALAELARRAGVPAGVFSVITGSATGIGGEMTSNPLVRKLTFTGSTDVGK
KLMAQCAGTVKKVSLELGGNAPFIVFDDADLDAAVEGAVISKFRNTGQTCVCSNRFLVQD
GIYDRFAEKLTQAVAMLKVGDGLKGETQLGPLIDMAAVEKVEEHIADAVAKGGRVVIGGT
RHALGGSFFEPTVLTGVTPDMLLAREETFGPVAPLFRFRTEEEAIQLANATEFGLAAYFY
SRDIARVWRVAEAVEYGIVGINTGLISTAVAPFGGMKESGIGREGSKYGIEEFLEVKYLC
IGGIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttagttctgaaagacagtggtctttttcagcagcgttgcttcatcaacggagcctgg
accggggccgacagcggggagaccatcgatgtcaccaaccccgccacgggggaaagcttg
gggagcatcccgaagatggggagcgccgagacccggcgcgccatcgaggctgcccaagcc
gccctgccggggtggcgcgccaagacggcgcaggaacgcgcggtgatcatcaggcgctgg
tccgagctgcttgtggtgcaccaggacgaccttgccgtgctgatgactgcggagcagggg
aagccgctggccgaggcccgcggcgagacggtttacgcggcgtcttttctggagtggttc
gccgaggaggggaagagaatctacggtgacgtcataccggcgccgcaaagcgacaagcgc
atcgtggtcctcaaggagccggtgggagtctgcgtcgccattaccccctggaatttccct
tccgccatgatcacccggaaggtcgcgcctgcgctggccgcaggctgcaccatggtggtg
aagcccgcaacggcgaccccatattcggcgctggccctggcggaactggcccggcgcgcg
ggagtccccgccggagtcttttcggtgatcaccggctccgcaaccggcatcggcggcgag
atgacctccaatccgctggtccgcaagctcaccttcaccggctccaccgatgtcggcaag
aagctgatggcgcagtgcgccgggacggtcaagaaggtttcgctggagcttggcggcaac
gcccccttcatcgtcttcgacgacgccgacctcgacgccgccgtcgagggggcggtcata
tccaagttccgcaacaccggccagacctgtgtctgctccaaccggttcctggtgcaggac
ggcatctacgaccgcttcgccgagaagctgacgcaagccgtcgcgatgctgaaggtgggg
gacgggctgaagggtgagacccagctggggccgcttatcgacatggcggcggtggagaag
gtcgaggaacatatagccgacgccgtcgccaaggggggacgtgtcgtcatcggcggcacg
cggcacgcgctgggaggttccttcttcgaacccaccgtgctgaccggggtcactccggac
atgctgctcgcgagggaggagacgttcggtccggtggcgccgctgtttcgcttccggacc
gaggaagaagccatccagttggcgaacgccaccgagtttggcctggccgcctacttctac
agccgggacatcgcgcgggtctggagggtggccgaggcggtggagtacggcatcgtcggc
atcaacaccggcctcatttccacggcggtcgctccctttggcggtatgaaggagtccggc
atcggccgggaaggctccaagtacggcatcgaggagtttctggaagtgaaatacctctgc
atcggcggcatacgataa
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