Geomonas subterranea: KP001_00950
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Entry
KP001_00950 CDS
T07936
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00920
Sulfur metabolism
gsub01100
Metabolic pathways
gsub01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
KP001_00950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_00950
Enzymes [BR:
gsub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
KP001_00950
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
KP001_00950
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
KP001_00950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXE91139
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All DBs
Position
220479..221447
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AA seq
322 aa
AA seq
DB search
MTATTAEIKRIVAEIEQADSFLITSHESPDPDAVGSSLALANYLTARGKDVTVYLCDPVP
DNCSFLPMSEQVYAEMPERDFDVCFVLDVGEFRRAGKAVTGNKRVGRFINIDHHLGCENF
GVCNLIDPKASATAALIYRIIKAAGDEVDYPTALCIYTAILSDTGSFHYSNSDPESFAIA
GEMIGKGVNAWSVNENLYESEPLQRIALLALALSDLTVSPSGEYASVTVTLDMYQKTGAT
AQDTDRFINYPRSIKGVQVALFFRQVDEGLFKVGFRSKGKVDVSAVSASFGGGGHHNAAG
CMVRGTLAEVKAQVFDRLEQMR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacgacagctgagattaagcggatagttgcggagatcgagcaggcagacagc
tttcttatcaccagccacgagagccccgaccccgacgcggtcggttcctccctggctttg
gccaattacctcaccgcgcgcggcaaggatgtcaccgtctacctgtgcgaccccgtcccg
gacaactgctccttcctcccgatgtcggagcaggtctacgccgagatgcccgagcgcgac
ttcgacgtctgcttcgtgctcgacgtcggggagttccggcgcgccggcaaggctgtcacc
gggaacaagagggtcggccgcttcatcaacatcgaccatcacctggggtgcgagaacttc
ggcgtctgcaacctgatcgaccccaaggcgagcgcaactgccgccctcatctaccggatc
atcaaggccgccggcgacgaggtcgattatcccaccgcgctctgcatctacaccgcgatc
ctttccgacaccgggagcttccactactccaactccgaccccgagtccttcgccatcgcc
ggcgagatgatcggcaagggggtgaacgcctggagcgtcaacgagaacctctacgagagc
gagcccctgcagaggatcgcgcttctcgcgctggctctctcggacctgaccgtctccccc
tcgggcgagtacgcctcggtgacggtgaccctggacatgtaccaaaagaccggcgccacc
gcccaggacaccgaccgtttcatcaactacccgcgctccatcaagggggtgcaggtggcg
ctctttttccgccaggtcgacgaggggctcttcaaggtcggcttcaggagcaaggggaag
gtcgacgtctccgcggtatccgcctccttcggcggcggcgggcaccacaacgccgccggc
tgcatggtgcgcgggacgctcgccgaggtcaaggcgcaggtcttcgaccggttggagcag
atgcgctga
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