Geomonas subterranea: KP001_00955
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Entry
KP001_00955 CDS
T07936
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsub03016
]
KP001_00955 (truB)
Enzymes [BR:
gsub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KP001_00955 (truB)
Transfer RNA biogenesis [BR:
gsub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KP001_00955 (truB)
Prokaryotic type
KP001_00955 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QXE91140
UniProt:
A0ABX8LNP5
LinkDB
All DBs
Position
221447..222334
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AA seq
295 aa
AA seq
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MLNGFFVIDKPAGVTSHDIVSKVRRAINQKKVGHTGTLDPFATGVLPVAVGEGTKAIQFL
DEAEKEYRAVLRLGIATDTQDLTGEVIAEREWSHLAPADLERLVPRFLGLQKQLPPMFSA
IKQGGVPLYKLARKGIEVEREAREVEIHALTFEWIRLPEACFTVRCSRGTYVRTLACDIG
EALGCGAHLLELRRTRSGLFREADAISIETLAGAADQQALLMPLDRALEHLKALFLTEAG
GRKVLNGVVPQPHDFIEAPGELAQGEQVRLYLGERFAAVAGHDKLKGLRLARVFN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacggctttttcgtgatcgacaagccggccggtgtcacctcgcatgacatcgtg
tccaaggtccgtcgcgccatcaatcagaagaaggtagggcacaccgggaccctcgatccc
tttgccaccggcgtcttgccggtcgcggtgggggaggggaccaaggcgatccagttcctg
gacgaggcggagaaggaataccgtgccgtcctgcggctggggatcgccaccgacacccag
gatctcaccggagaggtgatcgcagagcgggaatggtcgcatctcgctccggctgacctg
gagcggctggtgccgcgctttctcgggctccagaagcagcttcctcccatgttctccgcc
atcaagcaggggggcgtgccgctctacaagctggcccgcaagggaatcgaggtggagcgc
gaggcgcgcgaggtggagatccatgcgctcactttcgaatggatccggctccccgaggcc
tgtttcacggtgcgctgctcgcgcggcacctacgtgaggacgctcgcctgcgacatcggc
gaggcgctcggctgcggcgcgcatctgctggagctgcggcgcaccaggagcgggctcttc
agggaggccgacgccatcagcatcgagacgctggccggagccgccgaccagcaggcgctg
ctcatgcccctggaccgtgcgctagagcacctgaaggcacttttcctcaccgaggcgggt
gggaggaaggtgttgaacggcgtggtgccgcagccccatgatttcattgaagctccgggc
gaactggcacaaggggaacaggtgcgactctatctgggggagcgtttcgcggcagtagcc
gggcacgacaagctcaaagggctgcggctggcgcgtgtattcaattag
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