Geomonas subterranea: KP001_01105
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Entry
KP001_01105 CDS
T07936
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
gsub
Geomonas subterranea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QXE91168
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Position
252546..254582
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AA seq
678 aa
AA seq
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MLDLSRLNPEQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLILNKQVPPDRILAVTFT
NKAAKEMKERVEHLVGRKDSKGIVLSTFHSLGVRVLKRDIERLGYKKNFSIYSTADQVGL
VRQIVREVNTDSKKYDAESIIWRISGAKNKLIPPDRFAPNPLDDIDMMAALVYPRYQSAL
KAFNAIDFDDIIMLTAELLQHHPPVLKHWQERFGYIMVDEYQDTNSSQYLLVNLLAAGCK
NLCVVGDDDQSIYGWRGADVGNILDFEKDFHGCRTIKLEQNYRSTGNILEAANSVIGNNK
VRKAKRLWTASGQGPLIDLCIVQDDEEEATSVVERIQLERFKKDTPYSDFAILYRTNAQS
RAFEEQLRFEDIPYVLVGGTQFFERKEVKDSLSYLKVIANPLDEVALLRIVNFPRRGIGD
STVIRINQWSLEKEIPLFEAFSRVGEIEGISEAIRDKVLAFHQTLLDAAEAFRAEGGLAE
KGKTLFEKLKIEEEIFRTIDDQKAARRKVENVEQIINSMAAYEERVPQATLGGFIEKVSL
MDEDRFSGKDKKEHGKDAVTLMSLHSSKGLEFPFVFLVGMEDEILPHKRAIYEDDSIDEE
RRLCYVGITRARQQLVMTRTLYRKKYGKLEERVPSRFLEEIPGTVLNVQQSGVAKEVTPE
EAEKSAEDFFAKMKAMMG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacctgtcccgtctcaaccccgaacaactcgccgccgtgaaacatacggaaggg
gccctgctggtcctggccggcgccgggtccggcaagaccggggtgatcacctaccgtatc
gcgcacctgatcctgaacaagcaggtgccgccggaccgcatcctcgccgtgaccttcacc
aacaaggcggccaaggagatgaaggagcgggtcgagcacctggtggggcgcaaggactcg
aaggggatcgtcctttccacctttcactcactgggtgtccgcgtgctcaagagggacatc
gagcgcctggggtacaagaagaacttctccatctattccaccgccgaccaggtggggctc
gtgcgccagatcgtgcgcgaggtgaacaccgacagcaagaagtacgacgcggagagcatc
atctggcgcatctccggcgccaagaacaagctgatcccccccgaccgcttcgcccccaat
ccactggacgacatcgacatgatggccgcgctggtctacccgcgctaccagtccgcgctg
aaggcgttcaacgccatcgatttcgacgacatcatcatgctgacggcggagctgttgcag
caccacccgccggtcctcaagcactggcaggagcgcttcggctacatcatggtggacgag
taccaggacaccaactcgtcccagtacctcctggtgaacctcctggcggccggctgcaag
aacctctgcgtggtgggggacgacgaccagtccatctacggctggcgcggcgccgacgtc
ggcaacatcctcgacttcgagaaggatttccacgggtgccgcaccatcaagctggagcag
aactaccgctcgacgggcaacatcctggaagccgccaacagcgtcatcggcaacaacaag
gtgagaaaggcgaagaggctgtggaccgcctcggggcagggaccgctcatcgacctctgc
atcgtgcaggacgacgaggaggaggcgacgagcgtggtggagcggatccagctggagcgc
ttcaagaaggacaccccatacagcgacttcgccatcctgtaccgcaccaacgcgcagagc
cgcgcctttgaggagcagctccgtttcgaggacatcccctacgtcctggtcggcggcacc
cagttcttcgagcgcaaggaggtcaaggattcgctctcctacctgaaggtgatcgccaac
cccctggacgaggtggcgcttttgcggatcgtcaacttccccaggcgcggcatcggcgac
agcacggtgatccgcatcaaccagtggtcgctggaaaaggagatcccccttttcgaggca
ttcagccgggtgggggagatcgaggggatctcggaggcgatccgggacaaggtgctcgcc
ttccaccagacccttctcgatgccgccgaggccttccgggcggaaggcgggctggcggaa
aaggggaagaccctcttcgagaaactgaagatagaagaggaaatcttccggaccatcgac
gatcagaaggccgcacgccgcaaggtggaaaacgtggagcagatcatcaactccatggcc
gcctacgaggagcgggtgccgcaggcaacgcttgggggcttcatcgagaaggtgtcgctc
atggacgaggaccgcttctccggcaaggacaagaaggagcatggcaaggacgcggtgacg
ctcatgtcgctgcactccagcaaggggctcgagttccccttcgtgttcctggtcgggatg
gaggatgagattctgccccacaagcgggccatctacgaggatgacagcatcgacgaggag
cggcgcctttgctacgtcggcatcacgcgggcccggcagcagctggtgatgacgcggacg
ctgtaccggaagaagtacgggaaactcgaggagcgggttccatcgcgctttctggaggag
ataccgggcacggtgctgaacgtgcagcaaagcggggtggccaaggaagtgacgccggag
gaggcggaaaagagcgccgaggatttcttcgccaagatgaaggcgatgatggggtag
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