Geomonas subterranea: KP001_02705
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Entry
KP001_02705 CDS
T07936
Name
(GenBank) pilus assembly protein PilY
KO
K02674
type IV pilus assembly protein PilY1
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gsub02044
]
KP001_02705
02035 Bacterial motility proteins [BR:
gsub02035
]
KP001_02705
Secretion system [BR:
gsub02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
KP001_02705
Bacterial motility proteins [BR:
gsub02035
]
Pilus system
Pilus assembly proteins
KP001_02705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
QXE91474
LinkDB
All DBs
Position
620937..625808
Genome browser
AA seq
1623 aa
AA seq
DB search
MGKTVNRLFIKTLLPLIASVMLVPAAALAEDPGNNWCITPAFITSSIKPNLLLMIDNSAS
MYDLGYIAGSTSTAPTYSCGTATVSSSYCFDNTYDNTKNYEGYFSKLNSDGTFTYPVYEY
SGGKFVERASGVPASGGTFRTSYLYLAMSGDNTTVSPPTRVVDSFIASGRFLNWLSSSKF
DIEKKILTGGKYDNGVLVGETRGCVGRRFVKVVPGISGLSFAVRGPTSVEPNYDPSTQGG
GTRIEIFEGTYNQSDCQCAVYNWSSGNYGQASTDTKNCLSTTNADKALATINHTQQACWK
IKDNIRTGGDIWQGVSVNSLQVACASVYNDLNPAAITDESNGNYICTSAATHTAPVAPYI
GTGSDTTGFLGRCWRNNSDKWLNDGDACVKREILHYCMGQNFGEVTDPSSVIPTAGNIPS
VLMDAGVRAIGSPVGPSGNPGTCSRRTTTACSSDADCTTKVCSNNAATTCTTDANCTSPG
VCVSQTCNNPFYGKVEVSAPPTGLINDFAESIRFGVMNFNNYGSASECGGIVGMPCPKFC
SGNPNKVCSTNADCLASLNEGSCQDPTTPNRDAGSVVKNIGTAIGDHSSGVIGKIDSTPA
VAWTPFAEAYYNAIAYFVKDATATTPTLNTTKFTPTAAAIQAPLTDTQDPVITNQNPIQF
RCQQNNILLITDGSSTADKNDTMKNKVTDVSKVFRDPNTLTETGSTAGVCGSYGGSPFLH
DLSYFAYHRNIFDPSQVCHGTGAVACDNAQTIKTHVVYNAPSSSATTDVCDPYLQMKMTA
ENGGTLLHNPSNPTELRTELKAALESIAVGASSGTAASILSNSEGSGANILQAVFYPKKV
FADQTETKWIGEMQNLWYFVDPQINRSTIREDTDQNNIFDLIQDKVVSFRFDSTDNTTYA
WESQDLNGDGSGDTTEVKVDADTVKSIWRAGKKLWARPLTGTGARPRKIKTTINGTSLID
FSSDTFKGDSMVDNSATLAPYLDVADGAIATNLINYVHGLEQTGYRPRTVSIKETPSSTA
VSGVWRLGDIISSTPRIQSSLKLNTYNMQAPSGYSDSSYDTYVGSENYKNHGMVYVGAND
GMLHAFNFGKLNVTATSTQKATLEKLESTDPALGEEMWAYIPKQVLPYLKYYADVNYNHL
YYIDGATVLFDASIGAPSSIAGCSDATYYNCDKLNSVVDGSNNLDSTKNPWHSILIGGMG
LGGASSSSCTDPATNNCVPTPRMDPADNTKGLGLSSYFALDVSNPKSPTLLWEFKNENLG
FATTGPAIVRVGDKAKNGRWFAVFGSGPTGPVDTDGNQFEGRSNQRLKFFVVDLKTGTLV
TTLDGGVDNAFAGSMIGGSVDADRWNPYAAGNYQDDAIMVGFTKKTGTGSSATWTDGGVI
RIVTKNDTNPANWVVSKVVDGIGPVVTAIARLQDRKNMNMWYYFGTGRYFYRAGASIDDY
DTQRTIFGLKDPCYNTASVPGNKLDPNCGTTISTSDITDQSTAISTSIGSGGWKITLDPS
TTAFGAERVVSDAVTLTNGTVFVTTFEPTSDACGFGGNSFLWALGYNTGGRPSDAALSGK
ALIQLSTGEFKEVDLAQAFGSSASRLMRRSSTPMTGKPPADAFPVVSKSANKPVKKILHI
QER
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagactgttaacaggctcttcatcaagaccttgctgcctctgatcgcgtcggtc
atgcttgttcccgcggcggcattggccgaggatcccggtaacaactggtgcataacccct
gccttcatcaccagctcgatcaagccaaacctgttgttgatgatcgataactcggccagt
atgtacgatctcgggtacatcgccggatcgacctcgacagcgccgacttattcctgcggc
accgcgacggtctcttcatcctattgtttcgacaacacctacgacaacaccaaaaactac
gaggggtactttagcaagctcaacagcgacggtaccttcacctatccggtttacgagtat
tccggtggaaaattcgtagagagggcaagcggtgtgcctgccagcggtggcaccttccgc
accagctacctctaccttgccatgtcgggcgacaatacgaccgtctcccctcccaccagg
gtggttgatagcttcatcgccagcgggaggttcctcaactggctctcctcatcgaagttc
gacatcgagaagaagatcctgaccggcggtaagtatgacaatggcgtgctggtaggcgag
accaggggatgcgtgggacggcgcttcgtgaaagtagtgcccggcatctcggggctttcc
ttcgcggtccgcggccctacctccgttgagcccaactacgaccccagcacgcagggtggg
gggaccaggatcgagatcttcgaggggacctacaaccagtccgactgccagtgcgcggtc
tacaactggagcagcggcaattacggccaggcgagcactgacaccaagaattgcctctcc
accaccaacgcggacaaggcactggccaccatcaaccacacccagcaggcctgctggaag
atcaaggacaacataaggaccggcggcgacatctggcagggggtgagcgtcaactcgctg
caggtcgcgtgcgccagcgtatataatgacttgaacccggcggccattaccgacgagtcg
aacggcaactacatctgcaccagcgccgcgacccataccgcgccggtcgcgccctatatc
ggcaccggctccgataccaccggcttcctggggagatgctggaggaacaacagcgacaag
tggctaaacgacggtgatgcctgcgtgaagcgggagatcctgcactactgcatggggcag
aacttcggcgaggtcaccgacccctcctcggtcatccccaccgcggggaacatcccgtcc
gtgctcatggacgccggcgtgcgcgccatcggctcgccggtcggcccctccggcaacccg
ggcacctgctcacgccggaccacgaccgcctgctcctccgatgcggactgtaccaccaag
gtctgttccaacaatgctgctacgacctgcaccaccgatgcgaactgcacctcgccgggg
gtctgcgtcagccagacctgcaacaaccccttctacggcaaggtggaagtctctgctccg
cccaccggccttatcaacgacttcgccgagtccatccgtttcggcgtcatgaacttcaac
aattacggctcggccagcgaatgcggcggcattgtcggcatgccttgtcccaagttctgc
tccggcaacccgaacaaggtgtgcagcactaatgcagactgcctcgccagcctgaacgaa
gggtcctgccaggatcccaccacccccaacagggacgccggttcggtggtcaaaaacatc
ggtacggccatcggtgaccacagctccggtgtcatcgggaaaatcgacagcaccccagcc
gttgcctggacacccttcgccgaggcgtactacaacgccatcgcctacttcgtcaaggac
gccacagcaaccacgccgaccttgaacacaactaaattcaccccgaccgcagccgctatt
caggcgccgctcaccgacacacaagacccggttatcaccaaccagaacccgatccagttc
cgctgccagcaaaacaacatcctgctgatcacggacggttcctccaccgctgacaagaac
gacaccatgaagaacaaggtcaccgacgtctccaaggtcttcagggatccgaacacgctg
accgagacaggctcgaccgccggtgtctgcggcagctacggggggagcccgttcctgcac
gacctgagctatttcgcctaccaccgtaacattttcgacccgagccaggtatgccacggc
accggcgctgtcgcctgcgataacgcccaaacaatcaagacccacgtggtgtacaacgcg
ccgtccagcagcgccacgaccgacgtgtgcgacccctacctgcagatgaagatgacggcc
gaaaacggcggaaccttgctgcacaacccgagcaaccccaccgaactgagaacggaactg
aaggcggccctggaaagcatcgcggtcggcgcctcctccggtaccgccgcctccatcctc
agcaacagcgagggtagcggcgcgaacatactgcaggcggtgttctatcccaagaaggtc
ttcgcggaccagaccgagaccaagtggatcggcgagatgcagaacctctggtacttcgtc
gacccgcagatcaaccgctccaccatcagggaggacaccgaccagaacaatatcttcgac
ctgatccaggacaaggtggtcagcttccgcttcgacagcacggacaacactacctatgcc
tgggagtcccaggacctaaacggtgacggttccggcgacaccaccgaggtgaaggtggac
gccgacacggtgaagagtatctggcgtgcgggtaagaagctctgggcacggccgctgacc
ggcaccggcgccaggccgcgcaagatcaagacaaccatcaacggcacgtcgctcatcgac
ttctcctccgacaccttcaagggcgactccatggtggacaactcggctacgctggcgccg
tatctggacgttgcggacggtgcgatcgccaccaacctgatcaactacgtgcacggactc
gagcagaccggctaccgtcccaggaccgtttccatcaaggagaccccgtcgagtacggcc
gtgtcgggggtctggcgcctgggggacatcatatcctcgacgccccgcatccagtcgagc
ctcaagctgaacacctacaacatgcaggcccccagcggctacagcgacagctcttacgac
acctacgtcggatctgaaaactataaaaatcatggcatggtgtacgtcggggccaatgac
ggcatgctgcacgccttcaacttcggcaagctcaacgtcaccgcgaccagcacccagaaa
gcgaccctcgagaagcttgagagcaccgatcccgcccttggcgaggagatgtgggcatac
atcccgaagcaggtgctgccgtacctcaagtactacgccgacgtcaactataatcacctc
tactacatcgacggcgccaccgtgctcttcgatgccagcataggcgcgcctagcagcatc
gcgggctgctccgacgcgacctattacaactgcgacaagctcaactccgtggtggacggc
agcaacaacctcgacagcaccaagaacccctggcacagcatcctgatcggcggcatggga
ctgggcggggcctcctcgtcgagctgcaccgacccggcgaccaacaactgcgtgccgaca
ccgcgcatggatcccgccgataacaccaaagggctcggcctctcctcctacttcgccctc
gatgtgagtaatcctaagagcccgacccttttatgggaattcaagaacgaaaaccttggt
ttcgccaccaccggtccggccatcgtcagggtgggggacaaggccaaaaacgggcgctgg
ttcgccgtgttcggctccggccccaccgggccggtagacaccgacggcaaccagttcgag
gggcgctccaaccagcggctcaagttcttcgtggtcgacctgaagaccggtaccctcgtg
actacgctcgacggcggagtcgacaatgccttcgccggttccatgatcggcggctccgtc
gacgccgaccgctggaatccgtacgcggcaggaaactaccaggatgacgccatcatggtc
ggcttcaccaagaagacaggtaccggcagctccgccacctggaccgacggcggcgtgatc
aggatcgtcaccaagaacgacaccaaccccgccaactgggtggtcagcaaggtcgtcgac
ggcatcgggccggtggtgaccgcgatcgcgcggttgcaggaccgcaagaacatgaacatg
tggtactacttcgggaccggcaggtacttctatcgcgcgggagcgtccatcgacgactac
gacacgcagcgcacgatcttcggcctgaaggacccctgctacaacaccgcgtccgttccc
ggcaacaagctggacccgaactgcggcaccaccatcagcacctcagacataaccgaccag
tccaccgccatctccaccagcatcggcagtggcgggtggaaaatcaccctcgacccctcc
acgacggccttcggcgccgagcgcgttgtttccgacgcggtgacgctgaccaacggcacc
gtcttcgtgaccaccttcgagccgacctcggacgcctgcggcttcggcggcaactccttc
ctgtgggccctgggctacaacaccggagggaggccaagcgacgccgctctttccggcaag
gcgctgatccagctttcgacgggcgagttcaaggaggtcgacctggcccaggccttcggc
agcagcgcgtcccgcctgatgcggcgcagctccaccccgatgaccggaaaaccgccggcg
gacgccttcccggtcgtcagcaagagcgccaacaagccggtgaagaagatcctgcacatc
caggagcgttaa
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