Geomonas subterranea: KP001_02970
Help
Entry
KP001_02970 CDS
T07936
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00541
Biosynthesis of various nucleotide sugars
gsub01100
Metabolic pathways
gsub01250
Biosynthesis of nucleotide sugars
Module
gsub_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KP001_02970 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gsub01005
]
KP001_02970 (kdsB)
Enzymes [BR:
gsub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
KP001_02970 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
gsub01005
]
Lipid A
KP001_02970 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Secretin_N
Motif
Other DBs
NCBI-ProteinID:
QXE91525
LinkDB
All DBs
Position
680443..681198
Genome browser
AA seq
251 aa
AA seq
DB search
MKITAVIPARYASTRFEGKALADIMGKPMVQHVYERASRANLVSDVIVATDDERIAAAVR
AFGGRVEMTSADHETGTDRLAEVAGRLDADIIVNVQGDEPLIDPAMIDQAIAPMLEDPSI
PMATLKCRIKTLHDFLSPNVVKVVADPKGNVLYFSRSPLPFFRDKWNDLKDDAFCCGKLL
CYKHVGLYVYRREFLPVFASLPPSYLEMAEKLEQLRVLENGYRIRIVETECESIGVDTPA
DLEKVLAKLKG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaccgcggtaattcccgccaggtatgcttctacgcgttttgagggtaaggca
ttggcggacatcatggggaaacccatggtgcagcatgtgtatgagcgcgcctcccgggcc
aacctcgtttccgatgtgatagtggcgaccgatgacgagcggatcgccgccgcggtgcgc
gccttcggcggtcgcgtcgagatgacctccgctgatcacgagaccgggaccgaccggctg
gccgaggttgcgggaaggctcgatgccgacatcatagtcaacgtgcagggggacgagccg
ctcatcgatccggccatgatcgaccaggccatcgccccgatgctggaagatccgtccatc
ccgatggcgaccctcaagtgccgcataaagacgctgcacgacttcctttcgccgaacgtg
gtgaaggtggtcgccgacccgaaggggaacgtgctctacttttcccgttcgccgctgccg
tttttccgcgacaagtggaacgacctgaaggacgacgccttctgctgcgggaagctcctg
tgctacaagcacgtggggctctacgtgtaccgcagggagttcctcccggtgttcgcctcg
cttccgccgagctatctggagatggccgagaagctcgagcagttgcgggtgctggagaac
ggctaccggatcaggatcgtcgagaccgagtgcgagtccatcggtgtcgacaccccggcc
gacctggagaaggtgctggccaagcttaaagggtaa
DBGET
integrated database retrieval system
