Geomonas subterranea: KP001_03360
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Entry
KP001_03360 CDS
T07936
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gsub
Geomonas subterranea
Pathway
gsub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP001_03360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_03360
Enzymes [BR:
gsub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KP001_03360
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP001_03360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QXE91595
LinkDB
All DBs
Position
765989..766666
Genome browser
AA seq
225 aa
AA seq
DB search
MAEMEERELLLRSLKGYLTDLADSGVEELSYGPPTAAPPAPVTAPPAGAGTPAPAAAAPV
AEAAPAAVVSPSASGADVAGPAATGALCRQEGNPRARLLFLMAGPGYAGAAGDLLTRIIA
GMKFSTGDVCLISFDAGGDAALTAGCVAQRIAAVEPEVVVALGEEAAGLILPGVALEKVR
GCWHDAQGRGVMPTLHPDALLANEGLKRLVWEDMKLVMRRLAGAP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatggaggagcgtgaactgctgttgcgctcgctgaaggggtacctgacggat
ctggccgacagcggcgtggaggaactgagctacggtcccccgacggcagcgcccccggct
cctgtgaccgctcccccggcgggagccgggactcccgctcccgccgcagccgcgccggtc
gccgaagcagctccggcagccgttgtttccccgtctgcctccggggctgatgtcgctggt
ccggccgcgaccggggccctctgccggcaggaggggaacccgcgcgcccgtctgctcttc
ctgatggccggtcccgggtatgcgggcgcggccggggatctgctgaccaggatcatcgcc
ggtatgaagttcagcaccggggatgtctgcctgatcagcttcgatgcagggggggacgcc
gccctgaccgccggttgcgtggcgcagcggattgccgccgtggaaccggaggtggtggtc
gcgctgggcgaggaggccgcgggcctcatccttcccggggtggccctcgagaaggtgcgc
gggtgctggcacgacgcccaggggaggggggtcatgccgaccctgcaccctgacgccctt
ctggcgaacgaaggtctcaagcgcctggtctgggaggatatgaagctcgtcatgcgccgg
ctggcaggggcgccctag
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