Geomonas subterranea: KP001_05510
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Entry
KP001_05510 CDS
T07936
Name
(GenBank) PAS domain S-box protein
Organism
gsub
Geomonas subterranea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
PAS_8
HATPase_c
Response_reg
dCache_1
PAS_3
PAS_7
HisKA
Cache_3-Cache_2
Diguanyl_cycl_sensor
HAMP
dCache_2
PAS_GdpP
HPTransfase
Nif11
MLTR_LBD
DUF1236
Motif
Other DBs
NCBI-ProteinID:
QXE91989
LinkDB
All DBs
Position
complement(1258168..1261953)
Genome browser
AA seq
1261 aa
AA seq
DB search
MRPFSLKTKMTVTISLLMAGLLSILALSTHLYFNDQIKGLLFTQQFNMVTALADQIDDKL
RLSQTELAATAGTLKAGDVNDPQTLRRFFGQRPGNLTMFDNGLFLFSAQGTLLSGNPLDK
GITGKNFLHREYLKKTLATRQPQISAPFLSAQSHGHPIIMLTAPVFDDRGEIAAVLAGSI
DLTKDNFVTRIGKVTLGEKGYLYLYSTDRVMIAHPDTRRIFKQDVPLGKNRLYDEAIGGY
EGTGETTNSRGVRVISSFKRLHTTNWILASNFPQDEAYAPIYRARSYILAALFVVFLISM
LVVWLCMKFLTAPLITFTEQIRMLTQNKGGGARINISAGDEIGVLGDAFNQLLEELQQQK
HELKRELDFSQKLIEVTPIPVFYKGDDGRYLGCNQAFLNFTGLTRDRVIGKTVFDVAPGP
LAEAHHRHDQELIASGGVQVYEGKAMHVDQEERDVIFFKTSFTATGGVCGGVLGVMLDIT
ERKQAEAALQSQKEFAESLVLNMTQPTFVLDHQHRVIMWNRALATLTGIEPGEVLGSDHL
GKIFYGIDRPVLADLVLDGQVDDAGKYFSSYRESPLIEGGIQAEGWYKDPDGTGHYITLN
AAQIRDRQGRVVGAIQNLEDITERKHAEEAHEKTRRQLQLILDAAGEGINGVDMQGRITF
VNPAAAQMVGWTQEELLGQHQHSLMHHTREDGSPFPEQDCPMSTACYEGRPYQGSDELFW
RKDGSSFYAEYNCRPLREGGELVGAVVVYKDVTERRLADEQLLKLSQAVMQSPVAIIITD
TTGNIEFVNPRFTEIAGYTSEEVIGENPRILQSGKTSPELYQGMWDTITSGRIWSGELYN
RHKNGTAFWQHATISPILNSAGNICHFMAFMESISERKKLEEQLRQAQKMEAIGQLAGGV
AHDFNNILTVILGFGQLLQHSLPPNDPMLDHMEQILDAADRATHLTKSLLAFSRKQVMVM
QQVELNELARRHAKFLVRIIGEDVTLRTSFSDENLLVMADSGQLEQVLMNLATNARDAMP
AGGELTIKTELTTLDKEFHRQYGYGMPGRYALITVADTGTGMDAETQQKIFEPFFTTKLP
GRGTGLGMSIVYGIIKQHGGYITIFSQMGFGTTFSIYLPLITEKVQSGEKPVTFIPEGGS
ETILVVEDDAAVGRLVESVLKRYGYQVIRASSGDEALQLFESRRQEISLALLDVIMPKMN
GKQLCEELRRHSPQLKVLFLSGYTADVIQDKGIFLEEGVDILRKPARPIELANKVREMLD
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcccctttagccttaaaaccaagatgacggtcaccatttccctgctcatggcggga
ctgctgtccattcttgcgcttagcacccacctgtatttcaacgatcagatcaagggactc
cttttcacccagcagtttaacatggtcaccgcgctcgccgaccagatcgacgacaagctg
cgcctgtcgcagacggaactggcggccacggccggcaccctcaaagccggggacgtcaat
gatccccaaacactgcggagattcttcggccagcgccccggaaatctgaccatgttcgac
aacgggctgtttctgttctccgcccaggggacgctgctttccgggaacccgctggacaag
ggcatcaccggcaagaacttcctgcacagggagtatctcaaaaaaaccctcgccaccagg
cagccgcagatatccgcccccttcctctccgcccagtcgcacgggcacccgatcatcatg
ctcaccgcgcccgtcttcgacgaccggggagaaatcgccgcggtgctcgccgggagcatc
gacctcaccaaggacaacttcgtgacccggataggcaaggttaccctgggagagaaaggg
tacctctacctgtacagcacggaccgggttatgatcgcccaccccgacacccgcaggatt
ttcaagcaggacgtgccgcttgggaagaaccggctctacgacgaggccatcggggggtac
gagggtaccggggagaccaccaactcgaggggcgtccgcgtcataagctccttcaaaagg
ctccataccaccaactggatactcgccagcaatttcccgcaggacgaggcctacgccccg
atctaccgggcgcgcagctacatcctcgctgccttgttcgtggtctttctcatctccatg
ctggtggtctggctgtgcatgaaattcctcaccgcgccgctgatcaccttcaccgagcag
atcaggatgctgacgcagaacaaaggggggggcgcgcgcatcaacatatctgcgggcgac
gagataggggtgctgggcgacgccttcaaccaactgctggaggaactgcagcagcaaaaa
catgagctgaagcgggagctcgatttctcgcaaaagctcatcgaggtcacccccattccc
gttttctacaagggcgatgacggcaggtatctcgggtgcaaccaggccttcctcaacttc
acgggtctcaccagggaccgcgtcataggcaagaccgtcttcgacgtggcccccggcccg
ctcgccgaagcccaccaccgtcacgaccaggaactcatcgcctcaggcggcgtgcaggtc
tatgaaggcaaggcgatgcatgtcgatcaggaggagcgcgacgtcattttcttcaagacc
agcttcaccgccacaggcggcgtctgcggcggtgtccttggtgtcatgctcgacatcaca
gagcgcaagcaggccgaggctgccctgcagtcccagaaggaattcgccgaaagcctcgtc
ctgaacatgacgcagccaacgttcgtactggaccaccagcaccgcgtcatcatgtggaac
cgcgccttggcgaccctcacggggatcgagccgggcgaggtgctgggctccgaccatctc
ggcaaaatcttttacggcatcgaccgccccgtcctggccgaccttgtgctggatggacag
gtcgatgacgccggtaaatacttcagcagttaccgtgagtctcctctgatagagggaggg
atacaggccgaaggatggtacaaggatccggacggcaccgggcattacatcaccctcaac
gccgcgcagatccgtgaccggcaggggagggtggtcggcgcgatccagaacctcgaggac
atcaccgagcgcaagcatgccgaggaagcgcatgaaaagacccggcgccagctgcagctc
atcctggacgcggccggtgaagggatcaacggcgtggacatgcagggacgcatcaccttc
gtgaacccggcggcggcacagatggtgggatggacccaggaagaacttctgggccagcac
cagcactccctgatgcaccacacccgggaggacgggtcaccattcccggaacaggactgc
ccgatgtccaccgcctgctacgagggacgtccctaccaggggagcgacgagttgttctgg
cgcaaggacggcagcagtttctacgccgagtacaactgcaggcccctgcgcgagggggga
gagctggtaggcgccgtcgtcgtctacaaggatgtgaccgaacggaggctggcagatgag
cagctgctgaagctgtcccaggcggtgatgcagagtcccgtcgccatcataatcaccgac
accacaggcaacatagagttcgtcaatccgcgcttcaccgagattgccggctacacctcc
gaagaggtcataggagaaaacccacgcatcctgcaaagcggcaagacatcgcccgaactg
taccaggggatgtgggacaccatcacctcgggccggatctggagcggcgaattgtacaac
cgccataaaaacggcaccgccttctggcagcacgccaccatatccccgatcctgaacagt
gccggcaatatctgccatttcatggccttcatggaaagcatcagcgagcgcaagaaactt
gaggagcagctgaggcaggcgcaaaagatggaagcgatcggccagttggccggaggggtc
gctcacgatttcaacaacatactcaccgtcattctcggcttcgggcagttgctgcagcac
tccctgcccccaaacgacccgatgctcgaccacatggagcagatcctcgatgccgccgac
cgggccacgcacctcaccaagagtcttctggccttcagccggaagcaggtcatggtgatg
cagcaggtcgagttgaacgaactggcccgcaggcacgccaagttcctggtccggatcatc
ggcgaagacgtgacgctcagaacctccttcagcgatgagaacttgctggtgatggccgac
agcggtcagttggagcaggtgctgatgaacctcgccaccaacgccagggacgccatgccc
gccggcggggagctcaccatcaagacggagctgaccaccctggacaaggagttccaccgc
cagtatgggtacggtatgcccggccgctacgccctcatcaccgtcgccgacaccggaacc
gggatggatgccgaaactcagcagaagatattcgagcccttcttcacgacgaaactcccg
ggtcgcggcacgggactcgggatgtccatcgtgtacggcatcatcaagcagcatggcggc
tacatcactatattcagtcagatgggcttcggcaccaccttcagcatctacctgcccctg
ataaccgagaaggtgcagtccggcgaaaagccggtcaccttcatcccggaggggggaagc
gagaccatcctggttgtggaggatgacgccgctgtagggcggctggtcgagtcggtgctt
aagaggtacgggtaccaggtcatacgcgcgagcagcggggatgaagccttgcagctcttc
gagtcgaggcggcaggagatcagcctggcgctgctcgacgtgatcatgcccaagatgaac
ggcaaacagctctgcgaggaactccgtcgtcattctccccagttgaaagtactgttcctg
agcggatataccgccgacgtgatacaggacaaggggatcttccttgaggaaggcgtcgat
atcttacgcaaacccgcgagaccgatcgaactcgccaacaaggtccgggagatgctcgac
agctga
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integrated database retrieval system
