Geomonas subterranea: KP001_07450
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Entry
KP001_07450 CDS
T07936
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
gsub
Geomonas subterranea
Pathway
gsub02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KP001_07450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gsub02022
]
KP001_07450
02035 Bacterial motility proteins [BR:
gsub02035
]
KP001_07450
Two-component system [BR:
gsub02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KP001_07450
Bacterial motility proteins [BR:
gsub02035
]
Pilus system
Twitching motility proteins
KP001_07450
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA
Mg_chelatase
bpMoxR
AAA_2
IstB_IS21
AAA_7
HTH_SUN2
nSTAND3
MCM
AAA_22
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QXE92348
UniProt:
A0ABX8LQ20
LinkDB
All DBs
Position
complement(1725572..1726945)
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AA seq
457 aa
AA seq
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MRARILVVDDELSMREFLAILLDGEGYLVDQAESAEDALSRLGRQHYEMVISDVSMPGLG
GIELLSRIKSESPDTAVLMITAFTTAEQAVEAMKLGAYDYIGKPFKVEEVKVLVRKALEK
QSLVQENKRLKAEVQERFSFSGMIGKSKEIREVYELIEKVADSMANVLITGESGTGKELA
ARAIHYNSPRKNASFVAVNCGAIPETLIESELFGHAKGAFTGAIADRPGLFEQAEGGTLF
LDEIGELPLQLQAKLLRVLQEREFRRVGGGTSLKADVRIVAASNRNLEEQVREGSFREDL
FYRLNVVQIRMPSLKERSEDIPALVEHFYKKYSIWSGGGDIITPDALRVLFNYPFPGNVR
ELENLVERCVVLGSRVIGLDCLPASVREHHTVALPSSELEIPEEGLDLQAYLDSLEQKLL
VQAMEKSGGVKKRAAALLGMTFRSFRYRLAKFGMDEE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccaggattttggttgtcgatgacgagctgagcatgcgggagtttctcgccatc
ctcctcgatggcgagggatacctggtggaccaggcggaaagcgccgaggatgccctgtcc
cgcctggggcggcagcactacgagatggtgatctcggacgtgagcatgccgggactggga
gggatagagctcctctcccgcatcaagtccgaatctccggacaccgccgtcctcatgatc
accgccttcaccacggcggagcaggcggtggaggcgatgaagcttggcgcctacgactac
atcggcaaacctttcaaggtggaagaggtaaaggtgctggtgcgcaaggccctggaaaag
cagagcctcgtgcaggagaacaagcggctgaaggccgaggtgcaggagcgcttcagcttc
tccgggatgatcggcaagagcaaggagatacgcgaggtctacgagctcatcgagaaggtc
gccgacagcatggccaacgtactcatcaccggtgagagcggtaccggcaaggaactcgcc
gccagggcgatccactacaattctccgcgcaagaacgcctctttcgtggcggtcaactgc
ggcgccatccccgaaacgctcatcgagagcgaactcttcggtcacgccaagggggccttc
accggcgccatcgccgaccgtccgggcctcttcgagcaggccgaggggggtacccttttc
ctggacgagatcggggagctccctttgcagctgcaggcgaaactgctgcgcgtgctccag
gagcgcgagttccgcagggtagggggggggacttccctcaaggcggacgtgcgcatcgtg
gccgcctccaaccgcaacctcgaggagcaggtgcgcgagggaagcttccgcgaggacctc
ttttaccgcctcaacgtggtccagatacgcatgccctccctcaaggagaggagcgaggat
atcccggcactggtcgaacatttctacaagaagtactccatctggtccggggggggcgac
atcataacccccgacgcgctgcgcgtccttttcaactaccctttcccgggcaacgttcgg
gagctcgagaacctggtcgagcgctgcgtcgtgctggggagcagggtgatcggccttgac
tgccttcccgcttcggtgcgtgagcatcacacggtggctcttccttccagtgaactggag
attcctgaagagggattggacctgcaggcttacctcgacagcctggagcaaaagctcctc
gtgcaggcgatggagaagagcggcggtgtgaagaagcgggcggcggcgctgctggggatg
accttccgctctttccgctaccgcctggccaagttcggcatggatgaggagtga
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