Geomonas subterranea: KP001_08660
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Entry
KP001_08660 CDS
T07936
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
gsub
Geomonas subterranea
Pathway
gsub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KP001_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_08660
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KP001_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
DivIVA
YkyA
DUF4226
Motif
Other DBs
NCBI-ProteinID:
QXE92570
LinkDB
All DBs
Position
1994576..1996921
Genome browser
AA seq
781 aa
AA seq
DB search
MIDKDTLKRLEFDKILETAATFAHCEASHDGALAIEPLDSRQEMELRLGLVDEIRKLTRL
GIALKLAPFEDITPQVKAVRPAGAVIAPVALQRFIPTLRVMAAVASQLSFRSDVPLLLAE
AGCVTGFPDLLNPLEHTVNEEGEILDTASRLLADIRGRKKGLTARIKKRLEEIVRERHTA
IFLQDDFITQRSGRWVIPVRMDSKGMVPGVVHDVSNSGETAFMEPLEIIGLANELENLVA
DERAEEIRIVRQICDWIREDAEAILQQFEALVELDILNCIATLSDRLKSETPVIADTPTI
LLKSARHPILTLMGKEVVPLDLEMAAENRVMVVTGPNTGGKTIAIKNAGLLSVMALCGMP
VPALPGTVLPMVRSILVDIGDEQSIEESLSTFSAHISKISSIIGHADRDALVLLDELGTG
TEPGQGAAIACAVLKELQNKGALVVATTHLTEIIGFVQREPGMVNAAMAFDRQKLAPLYR
LVVGEPGESHALEIASRYGLPERVVSFARGMIGTMEADFHALLRDLKEKREQLDRTLSEL
SEREEKLSRAESNLVDRRDEAARLVQDAREKGLLEAQQIISKARREVAAMIDEAKREKAR
EAKERLDQAAREVEAALDGLHPEENVDPEAVSAGDVLFVKPLNCDATILSVDRRAGRARV
RAGSMELDVALSSLLKPKGKEPKKVRKQRARQQEAESAVQEPATSINLLGRRVEEAIGEL
EPFLNHASLERISEVRVVHGKGTGALMKGVRAYLAGHPLVAEFRTGERFEGGDGVTVVTL
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaaggacaccctgaagcggctggaattcgacaagatcctcgaaaccgccgca
accttcgcccactgcgaggcatcccacgacggtgccctcgccattgaaccacttgattcc
cggcaggagatggaactgcgcctggggctcgtcgacgagatccgcaagctgacgcggctc
ggcatcgcgctcaaactcgcccccttcgaggacatcaccccgcaggtgaaggccgtgcgt
cccgccggcgcggtcatcgctccggtcgccttgcagcgtttcatccccaccctgcgcgtc
atggccgcggtggcctcccaactctccttccgcagcgacgtgccgctgctcctcgccgag
gccggatgcgtcaccggattccccgaccttctgaacccgctcgagcacacggtcaacgag
gagggtgagatcctcgacaccgcctcgcggcttttggcggacatccgcggcaggaaaaag
gggctcaccgcccgcatcaagaagcggctggaggagatcgtgcgcgagcggcacaccgcg
atcttcctgcaggacgacttcatcacccagaggtccgggcgctgggtcatcccggtgcgc
atggattccaaggggatggtccccggggtggtgcacgacgtctccaactccggggagacc
gcgttcatggagccgctggagatcatcggactcgccaacgaactggagaacctggtggcc
gacgagcgcgccgaggagatccgcatcgtccggcagatctgcgactggatcagggaggac
gccgaggccatcctgcagcagttcgaggcgctggtcgaactcgacatcctgaactgcatc
gccaccctgagcgaccggctcaagagcgaaaccccggtcatcgccgacacccccaccatt
ttgctcaagtcggcgcgccacccgatcctcaccctcatggggaaggaggtggtccccctg
gacctggaaatggccgcggagaaccgggtcatggtggtcaccggcccgaacaccggcggc
aagaccatcgccatcaagaacgcgggacttctctccgtcatggccctgtgcggcatgccg
gtccccgccctccccgggaccgtgctgccgatggtcaggagcatcctggtggacatcgga
gacgagcaatccatcgaggagagcctctccaccttctcggcccacatctccaagatctcc
agcatcatcgggcacgccgaccgcgacgcgctggtgctcctggacgaactgggcaccggc
accgagccgggacagggggcggccatcgcctgcgccgtcctgaaggagctgcagaacaag
ggtgcgctcgtcgtcgccaccacccacttgaccgagatcatcggcttcgtgcagcgcgaa
ccgggcatggtgaacgcggccatggccttcgaccggcagaagctcgcgccgctgtaccgg
ctggtggtgggagagcctggcgagtcgcacgccctcgagatcgccagccgctacggcctc
cccgagcgggtggtgagcttcgcgcgcggcatgatcggcaccatggaggcggattttcac
gccctcttgcgcgacctgaaggagaagcgcgagcagttggaccgcaccctctccgagctt
tccgagcgggaggagaaactctcgcgggcggaaagtaacctggtggaccgccgcgacgag
gccgcgaggctcgtgcaggacgcccgcgagaaggggcttttggaggcgcagcagatcatc
tccaaggcgcgccgcgaggtggccgccatgatcgacgaggccaagcgcgagaaggcgcgc
gaggccaaggagagactggaccaggcggcacgcgaggtcgaggcggcgctggacggactg
catccggaagagaacgtcgacccggaagcggtctccgccggggacgtcctcttcgtgaag
ccgctcaactgcgacgccaccatcctctcggtcgatcgccgcgccggacgggcccgcgta
cgcgccggaagcatggaactggacgtggcgctctcgtcgctgttaaagcccaaggggaaa
gagccgaagaaggtacgtaaacagcgcgcccggcagcaggaagccgagtccgcggtgcag
gagcccgcgaccagcatcaacctcctggggcggcgggtggaggaagccatcggcgaactg
gagcccttcttgaaccacgcctccctggaacggatctccgaggtccgggtggtgcacggc
aagggaaccggcgccctgatgaagggggtgcgcgcctacctggccgggcacccgctggtg
gccgagttccggaccggggagcgtttcgaagggggcgacggagtcaccgtggtgacgctg
cgctag
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