Geomonas subterranea: KP001_09330
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Entry
KP001_09330 CDS
T07936
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP001_09330 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gsub01007
]
KP001_09330 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsub03016
]
KP001_09330 (aspS)
03029 Mitochondrial biogenesis [BR:
gsub03029
]
KP001_09330 (aspS)
Enzymes [BR:
gsub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
KP001_09330 (aspS)
Amino acid related enzymes [BR:
gsub01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KP001_09330 (aspS)
Transfer RNA biogenesis [BR:
gsub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KP001_09330 (aspS)
Prokaryotic type
Other AARSs
KP001_09330 (aspS)
Mitochondrial biogenesis [BR:
gsub03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KP001_09330 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
QXE92699
UniProt:
A0ABX8LQ30
LinkDB
All DBs
Position
complement(2151153..2152937)
Genome browser
AA seq
594 aa
AA seq
DB search
MIDFLGDWKRTSYCGELRAEHIGQDVVLMGWVAKRRDHGGLIFVDLRDRDGVAQVVFDPE
RNSEAHAKAETARNEFVLAIKGTVAARPEGTVNPKMKTGAVEVLVKECKLLNPSKALPFT
LDGFVDVNENIRLKYRYLDLRTGQLQQNLILRSKVAQLTRSYLTDNGFLELETPFLTKST
PEGARDFLVPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQPEF
TQIDCEMSFIDREDIITVMEGLMARIFTEARGVKVELPIQRMTYQEAIRRFGVDNPDLRF
GLELVELSDIVKSSGFKVFADVVNGGGIVKGINVKGAGAMSRKEIDDLTEFAKIYGAKGL
AYVKMTAEGWQSPIAKFFTPEEIATMDKAFDAQEGDLLLFVADKPKVVNDSLGKLRNHLA
AKMGLTDPNVYRFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLQYVESDPGRCRAKA
YDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIAF
GLDRLMMLITGSDSIRDVIAFPKTQKGACLMSEAPSGVDTLQLRDLGIRLAAKQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttctgggcgattggaagagaaccagttattgcggcgagttgcgggccgag
cacatcggtcaggacgtggtcctgatgggatgggtagccaagcggcgcgaccacggcggg
ctcatcttcgttgacctgcgcgaccgggacggcgtcgcccaggtggttttcgacccggaa
aggaactccgaggcgcacgccaaggccgagaccgcacgcaacgagttcgtgctcgccatc
aaaggtaccgttgccgcccgcccggaagggaccgtcaacccgaagatgaagaccggcgcg
gtcgaggtcctggtgaaggagtgcaagctcctgaacccctccaaggcgcttcccttcacc
ctggacggctttgtcgacgtcaacgagaacatccgcctcaagtaccgctacctcgacctg
cgtaccggccagctgcagcagaacctgatcctgcgctccaaggtggcccagctcacccgc
tcctacctgactgacaacggcttccttgagctggagaccccgttcctcaccaagtcgacc
ccggaaggggcccgcgacttcctggtcccctcgcgcatcaacaagggcgagttctacgcc
ctgccgcagtccccgcagctcttcaagcagatcctcatggtttccggcttcgaccgctac
ttccagatcgtgcgctgcttccgtgacgaggacctgcgcgccgaccgtcagccggagttc
acccagatcgactgcgagatgtccttcatcgaccgcgaggacatcatcaccgtgatggaa
gggctcatggcccgcatcttcaccgaggcgcgcggcgtgaaggtcgagctcccgatccag
aggatgacctaccaggaggcgatccgccgcttcggcgtcgacaacccggacctgcgcttt
ggcctggagctggtggagctctccgacatcgtcaagagttccggcttcaaggtcttcgcc
gatgtggtcaacggcggcggcatcgtcaaggggatcaacgtgaagggcgccggcgccatg
agccgcaaggagatcgacgatctcaccgaattcgccaagatctacggcgccaaggggctt
gcctacgtgaagatgaccgcggaagggtggcagtccccgatcgccaagttcttcacccct
gaagagatcgccaccatggacaaggcgttcgacgcgcaggaaggggacctgctcctgttc
gtggccgacaagcccaaggtggtcaacgactcgctcggcaagctcaggaaccacctcgcc
gccaagatggggctcaccgacccgaacgtgtaccgttttgtctggatcaccgacttcccg
ctcctcgagtgggacgaggaggagaagcgctgggccgccgtgcaccaccccttcaccgcg
ccgatggacgaggacctgcagtacgtggagagcgaccccggccgctgccgcgccaaggcc
tacgacctggtcctgaacggcaacgagataggcggcggctccatcaggattcaccaggaa
gaggtgcagtccctcatgttcaagatgctggggctctccgaggagaacgcgcgcagcaag
ttcggcttcctgctggatgccctcgagtacggcaccccgccgcacggcggcatcgccttt
ggcctggaccgtctcatgatgctgatcaccggttccgactccatccgcgacgtcatcgcc
ttccccaaaacccagaagggggcctgcctcatgtccgaggcgccctccggcgtcgatacg
ctgcagctgcgcgacctgggcatccgtctcgccgcgaagcagtag
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