Geomonas subterranea: KP001_09795
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Entry
KP001_09795 CDS
T07936
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gsub
Geomonas subterranea
Pathway
gsub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KP001_09795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsub03019
]
KP001_09795
Messenger RNA biogenesis [BR:
gsub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KP001_09795
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_3
Anti-Pycsar_Apyc1
Lactamase_B
RMMBL
Lactamase_B_6
TraS
Motif
Other DBs
NCBI-ProteinID:
QXE92782
UniProt:
A0ABX8LLM2
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Position
complement(2271790..2273028)
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AA seq
412 aa
AA seq
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MKVLIHRGSNEIGGTCIQLSTEKTTILLDLGQPLSNLSKTIDVSSMNPDAVLLSHPHQDH
FGLIDLLSPGIPVYIGELGKKLIDATRVLLGRDLHTNDFRHFKSWQPFHVGDFTITPYLV
DHSAVDAYGFLIAAEGKKVFYSGDFRAHGRKSKLFDSMLKTHPKDIDLLFMEGTMMQRDN
SEFPTETDVEEKIFETIRQQENISFLISSSQNIDRIVSAYRACLRAQKTLVIDIYTAWVL
EQLKLVSGSTPNMEWEQVRVYASYSHDEKLKERPDFFGDFRRRVYQHRITKEELAASPAD
FLYLGKMSSFGIIDKYRGVNPVNVVYSQWLGYLKSPNGEYYGAEEMAAYQNDPVINFIYA
HTSGHATVEDLQRFAEALNPKMLVPVHTEVNDRFSHSFQNVNIQTDGIKFVI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcttgattcacagaggtagtaacgaaatcggtggaacctgtatccagctttct
acagaaaagacaaccatccttctcgatcttggccaacctctctccaatcttagcaagacc
attgatgtatcaagcatgaatcccgatgctgtcctgctcagtcacccccatcaggaccat
ttcggcctgatcgacctcctgtcaccgggcattccagtgtatatcggggaactaggaaag
aagttgattgacgccactcgcgtgctgctagggagggatctccacacaaacgacttccgg
catttcaaaagctggcaacctttccacgtcggcgactttaccatcaccccatatctggtc
gatcattcagcagtcgatgcctacggcttccttatcgcggctgaagggaaaaaagttttc
tacagtggggatttcagggcgcacggtaggaagtcgaagctgttcgatagcatgctgaag
acccatcccaaggacatcgatctactgttcatggaggggaccatgatgcagcgtgacaat
agtgagttcccgacagagaccgatgtggaagagaaaatttttgaaacaattcgacaacag
gaaaacatctcgtttctcatctcttcatcccagaacatcgaccgcatcgtctcggcctac
cgtgcttgcctccgcgctcagaagactttggtgattgacatctacaccgcgtgggttctg
gagcagctcaaactggtgtctggcagtacacctaacatggagtgggagcaggttcgggtg
tatgcatcctacagccatgatgagaagttgaaggaacgcccagacttctttggggatttt
cgcagacgagtctaccagcatcgaataacaaaggaggagttggcggcgtccccagctgac
ttcttgtacctcggcaagatgtcttcatttgggatcatcgacaagtaccgtggagtaaac
ccagtcaacgtcgtctattcccagtggctcggatacttgaagtcgccgaatggagagtac
tatggagccgaagagatggctgcataccagaatgatccggtgatcaacttcatttatgct
cataccagcggacatgcgacggtggaagatcttcagcggttcgctgaggcgttaaatccg
aagatgttggtgccagtgcatactgaagttaatgacagattctcacatagtttccagaac
gtgaacatacagactgatggaattaaattcgtaatctaa
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