Geomonas subterranea: KP001_10935
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Entry
KP001_10935 CDS
T07936
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gsub
Geomonas subterranea
Pathway
gsub03030
DNA replication
gsub03430
Mismatch repair
gsub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KP001_10935 (holB)
03430 Mismatch repair
KP001_10935 (holB)
03440 Homologous recombination
KP001_10935 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsub03032
]
KP001_10935 (holB)
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_10935 (holB)
Enzymes [BR:
gsub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KP001_10935 (holB)
DNA replication proteins [BR:
gsub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KP001_10935 (holB)
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KP001_10935 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
QXE88984
UniProt:
A0ABX8LC39
LinkDB
All DBs
Position
2518234..2519196
Genome browser
AA seq
320 aa
AA seq
DB search
MPFSEVIGQERAISVLKRSIALERVAHAYLFSGIEGCGKKKTALAMVQAVFCGNEEACGV
CSSCRKIASGQHPDLHILEPDGAFIKIDQVRELQKELSYRPFEAPKKACIIDGAEKLNLA
SGNALLKTLEEPPGNALMILVTAERSAVLQTILSRCQTLEFQPLPAELIEGRLVRDQFPA
EAARVAASLSGGSLSRALEIAGDGVLEGRVSFLERVLSLNLKNINALFATAEELAADKEG
LPGFLELLLSFLRDVLIYPSTPDALANLDLTHLVAREAGHCTESTSIELIEQLVSLRRLL
VRNVNARLALEVFFMRLAAR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctccgaagtcatcgggcaggagcgggccatctcggtgctgaagcgctccatc
gcgctggagcgggtggcgcacgcctaccttttctccggcatcgaggggtgcggcaagaaa
aagaccgccctggccatggtgcaggcggttttctgcggcaacgaagaggcctgcggcgtc
tgttcctcctgccgcaagatcgcgagcggccagcacccggacctgcacatcctggagccc
gacggcgccttcataaagatcgaccaggtacgggagctgcagaaggagctctcctatcgc
ccgttcgaggcgcccaagaaggcgtgcatcatagatggcgcggagaagctgaacctcgcc
tcaggcaacgccctgttgaagaccctggaggagcctcctggcaacgcgctgatgatcctg
gtcaccgccgagcgctccgccgtgctgcagaccatcctctcccgctgccagacgctggag
ttccagccgttgccggcggagctgatcgaggggcggctggtgcgggaccagttcccggcc
gaggcggcgcgggtggcggcgtcgctttccggcggcagcctgagccgcgctctggagatc
gcgggagacggcgtcctcgaggggcgggtgagctttctggagcgggtgctcagcctgaac
ctgaagaatatcaacgccctcttcgccacggcggaggaactcgccgcggacaaggaaggg
ctgccgggatttctggagctgctcctctcctttctccgggacgtgctcatctacccatcc
acccctgacgcgctggccaacctggacctgacccacctggtggccagggaagccggacac
tgcacggaatcgacgagcatcgaattgatcgagcaactggtctcactgcgccggctgctc
gttcgcaatgtgaacgcgaggctcgccttggaggtcttcttcatgcgcctggcggcgcgg
taa
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