Geomonas subterranea: KP001_11155
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Entry
KP001_11155 CDS
T07936
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsub03032
]
KP001_11155
03036 Chromosome and associated proteins [BR:
gsub03036
]
KP001_11155
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_11155
DNA replication proteins [BR:
gsub03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KP001_11155
Chromosome and associated proteins [BR:
gsub03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KP001_11155
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KP001_11155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QXE89026
LinkDB
All DBs
Position
complement(2569823..2570104)
Genome browser
AA seq
93 aa
AA seq
DB search
MTKSELIDKLVEVRGALTRKDSEAVVSMVFDAMSEALTNGDKVEIRGFGSFTIRDREPRE
ARNPKSGEIVSIPSKKTPFFKTGKDLRERVNNL
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagcgaactgatcgacaaactggtggaagtacgcggtgctctgacccgcaag
gactccgaggcagtagtctccatggtgttcgacgccatgagcgaggccctcaccaacggc
gacaaggtggagatccgcggctttggcagcttcaccatccgcgaccgcgagccgcgtgag
gcgaggaatccgaagagcggcgagatcgtcagcatcccgagcaagaagaccccgttcttc
aagaccggtaaggacctgcgggagcgcgtgaacaacctctag
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