KEGG   Geomonas subterranea: KP001_11295
Entry
KP001_11295       CDS       T07936                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
gsub  Geomonas subterranea
Pathway
gsub02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gsub00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KP001_11295
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gsub02022]
    KP001_11295
Two-component system [BR:gsub02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   KP001_11295
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase bpMoxR AAA_3 AAA_16 ATPase AAA_2 MCM nSTAND3 AAA_22 AAA_7
Other DBs
NCBI-ProteinID: QXE89053
UniProt: A0ABX8LBL8
LinkDB
Position
complement(2601007..2602380)
AA seq 457 aa
MTETILIVDDEEGIRSSLAGILEDEGYRTVCAADGAEALALVQKELPGLVLLDIWMPRMD
GIETLKRLKEQHPALNVIMMSGHGTIETAVKSTKLGAYDFIEKPLSLEKVVVTVENALSM
NRLKEENAALRGQVQQGHEMIGNSAAMQQLAEQIRLVAPTNASVLITGENGTGKELVARS
VHYHSQRRDKPFIEINCAAIPEELIESELFGHERGAFTGAVAQKKGKFDLADGGTLFLDE
IGDMSLKTQAKVLRILQEKKFERVGGTRTLEVDVRIVAATNKLLEEEIKNGTFREDLYYR
LNVVPFKVPPLRERREDIPLLAGYFLDAFCDQEGREHKRIVPEAMDSLKRYDWPGNVREL
KNIVERLVIMTPGGTITMNHLPEDFVSAGGREGGGGKLDSVLELSSLREAREEFEREFIM
QKLEENDWNVSKTAEAIELERSNLHRKIKSYGIDMKK
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgaccgagaccattctgatagtcgatgacgaggagggtatccgctcctccctggccggc
atcctcgaggacgaggggtaccgcaccgtctgcgccgccgacggcgccgaggcgctcgcg
ctggtccaaaaggagctccccgggctcgtgctcctggacatctggatgcccaggatggac
ggcatcgagacgctcaagcgcctgaaggagcaacacccggccttgaacgtcatcatgatg
agcggccacggcaccatcgagaccgcggtgaaatcgaccaagcttggggcctacgacttc
atcgagaaaccgctctccctggagaaggtggtggtcaccgtcgagaacgcgctctccatg
aaccggctgaaggaggagaacgcggccctgcgggggcaggtgcagcaggggcacgagatg
atcggcaactcggccgccatgcagcagctggccgagcagatccggctggtcgcccccacc
aacgcctcggtcctcatcaccggcgagaacggcaccggcaaggagctggtggcccgctcg
gtccactaccacagccagcgccgggacaagcccttcatcgagatcaactgcgccgcgatc
cccgaggagctgatcgagagcgagctcttcggccacgagcggggcgccttcaccggcgcc
gtggcccagaagaaggggaagttcgacctggccgacggcggcaccctgttcctcgacgag
atcggggacatgtcgctcaagacccaggccaaggtgctgcgcatcctgcaggagaagaag
ttcgagcgggtgggggggacgaggacgctcgaggtggacgtccgcatcgtcgccgccacc
aacaagctcctcgaggaggagatcaagaacggcaccttccgcgaggacctctactaccgc
ctcaacgtggtccccttcaaggtgccgccgcttcgcgagcgccgcgaggacatcccgctt
ctggccggctacttcctggacgccttctgcgaccaggaggggcgcgagcacaaacgcatc
gtccccgaggcgatggattcgctcaagcgctacgactggcccggcaacgtgcgcgagttg
aagaacatcgtggagcggctggtgatcatgacccccggcggcaccatcaccatgaaccac
ctcccggaggacttcgtctcggccggcggccgggagggtggcggcgggaagctggacagc
gtgctggagctctcgagcctcagggaggcgcgcgaggagttcgagcgcgagttcatcatg
cagaagctcgaggagaacgactggaacgtctcgaagaccgcggaggcgatcgaactggag
cggagcaacctgcaccgcaagatcaagagctacggcatcgacatgaagaagtag

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