KEGG   Geomonas subterranea: KP001_11610
Entry
KP001_11610       CDS       T07936                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
gsub  Geomonas subterranea
Pathway
gsub00521  Streptomycin biosynthesis
gsub00523  Polyketide sugar unit biosynthesis
gsub00525  Acarbose and validamycin biosynthesis
gsub00541  Biosynthesis of various nucleotide sugars
gsub01055  Biosynthesis of vancomycin group antibiotics
gsub01100  Metabolic pathways
gsub01110  Biosynthesis of secondary metabolites
gsub01250  Biosynthesis of nucleotide sugars
Module
gsub_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:gsub00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    KP001_11610 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    KP001_11610 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    KP001_11610 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    KP001_11610 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    KP001_11610 (rfbB)
Enzymes [BR:gsub01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     KP001_11610 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4
Other DBs
NCBI-ProteinID: QXE89113
LinkDB
Position
complement(2668955..2670022)
AA seq 355 aa
MQDLFTPTSLLVTGGAGFIGSNFINHFMAGNPGCRVINLDLLTYAGNLKNLTAVEGNASY
RFVKGDICDAELVARLLAEEKVDAVAHFAAESHVDRSITGPDIFVRTNVLGTQTLLEASR
LHAEKLPDFRFLQVSTDEVYGSLGAEGYFTEETPLAPNSPYSASKAGADLLVRAYFETFG
LPTLNTRCSNNYGPYHFPEKLIPLMIHNILKKRSLPVYGDGLNVRDWLHVKDHSAAIERV
LKRGRPGEIFNVGGNNEWKNIDIVKLVCDLMDERLGRAAGESRELITFVKDRKGHDRRYA
IDASKLKRDLSWEPSYTFERGIAETIDWYLANQGWVEEVVSGAYREYYETQYGAA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcaggatctgttcacccccacctccttactggttaccggaggggcgggattcatcggt
tccaatttcatcaaccacttcatggcgggcaacccggggtgccgggtgatcaaccttgac
ctcctgacctacgcggggaacctgaagaacctgacggcggtggagggaaatgccagctac
cgcttcgtgaagggtgacatctgcgacgccgagctggtggcgcgccttttggccgaggaa
aaggtcgatgccgtggcccattttgccgccgaatcgcacgtcgaccgctccatcaccggt
cccgacatcttcgtgagaaccaacgtgctggggacccagaccctgctggaggcgagcagg
ctgcacgccgaaaagctccccgacttccgcttcctgcaggtttccaccgacgaggtctac
ggcagtctcggcgccgaggggtacttcaccgaggagacgccgcttgcgcccaactccccg
tactccgccagcaaggccggcgccgacctcctggtgcgcgcctatttcgagacctttggc
ctgccgaccctgaacacccgctgctccaacaactacggtccctatcacttccccgaaaag
ctgatcccgctcatgatccacaacatcctcaagaagcgttcgctgccggtgtacggcgat
ggcctcaacgtgcgggactggctgcacgtgaaggatcactccgccgccatcgagcgcgtg
ctgaagcgggggaggccgggggagatcttcaacgtggggggcaacaacgagtggaagaac
atcgacatcgtgaagctggtctgtgacctgatggacgagcgcctggggcgtgccgccggc
gagagccgcgagctgatcaccttcgtcaaggaccgcaaggggcacgaccggcgctatgcc
atcgacgcctcaaagctgaaacgggacctctcctgggagccgagctacaccttcgagcgc
ggtatcgccgagaccatcgactggtacctggccaaccaggggtgggtcgaagaggttgtc
agcggcgcctaccgcgagtattacgagacgcagtacggggcggcataa

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