Geomonas subterranea: KP001_12625
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Entry
KP001_12625 CDS
T07936
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00010
Glycolysis / Gluconeogenesis
gsub00020
Citrate cycle (TCA cycle)
gsub00260
Glycine, serine and threonine metabolism
gsub00280
Valine, leucine and isoleucine degradation
gsub00310
Lysine degradation
gsub00380
Tryptophan metabolism
gsub00620
Pyruvate metabolism
gsub00630
Glyoxylate and dicarboxylate metabolism
gsub00640
Propanoate metabolism
gsub00670
One carbon pool by folate
gsub00785
Lipoic acid metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
gsub01120
Microbial metabolism in diverse environments
gsub01200
Carbon metabolism
gsub01210
2-Oxocarboxylic acid metabolism
gsub01240
Biosynthesis of cofactors
Module
gsub_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gsub_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gsub_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
gsub_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP001_12625 (lpdA)
00020 Citrate cycle (TCA cycle)
KP001_12625 (lpdA)
00620 Pyruvate metabolism
KP001_12625 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
KP001_12625 (lpdA)
00640 Propanoate metabolism
KP001_12625 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KP001_12625 (lpdA)
00280 Valine, leucine and isoleucine degradation
KP001_12625 (lpdA)
00310 Lysine degradation
KP001_12625 (lpdA)
00380 Tryptophan metabolism
KP001_12625 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KP001_12625 (lpdA)
00670 One carbon pool by folate
KP001_12625 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsub04147
]
KP001_12625 (lpdA)
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
KP001_12625 (lpdA)
Exosome [BR:
gsub04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
KP001_12625 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_oxidored
FAD_binding_2
NAD_binding_8
GIDA
DAO
Thi4
FAD_binding_3
AlaDh_PNT_C
3HCDH_N
UDPG_MGDP_dh_N
VCIP135_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QXE89303
LinkDB
All DBs
Position
complement(2903984..2905390)
Genome browser
AA seq
468 aa
AA seq
DB search
MSEEIFDLIVIGAGPGGYVAAIRGAQLGMKVAVVEKRGSMGGVCLNEGCIPSKALLDSSE
LYHLARDRFAVHGIEVQPPTLNLGQMMARKDDVVKKLTDGIAFLFKKNKIVSFLGTASML
SPENGAHRVEVKGEETRVVTGRKVIIATGSEAVQVPTLPFDGESVVSAREALSFPAVPEH
LLVVGGGYIGLELGSVWLRLGAKVTVVELLPRLVAGSDGQVAEALLRSLKKQGMTFMLGA
KVAGAEKKDGKLLARVEAEGETAEIACDKVLVAVGRRPLTAGLNLEGIGVRMDGSRISVD
ADYATSVPGIYALGDLIAGPMLAHKAMEEGAVCVERMHGEPSQVDYGCIPGVCYTWPEAA
SVGKTEEALKEEGIAYKVGKFSFIANGRAKCMDETEGFVKLLTEAEGGRLLGVHILGPRA
SDMIAEAVTVMAFGGSGEDIALTVHGHPTLSEVMKEAALDLDKRAIHG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaaattttcgatctcatagtcatcggcgccggccccggcggatacgtcgcc
gccatcaggggcgcccaactcggcatgaaggtggccgtggtggaaaaacgcggctccatg
ggtggcgtctgcctgaacgagggatgcatccccagcaaggcgcttctcgactccagcgaa
ctgtaccacctcgccagggaccgcttcgccgtccacggcatcgaggtgcagcccccgacc
ctcaacctcgggcagatgatggcccgcaaggatgacgtggtcaagaagctcaccgacggc
atcgcgttcctcttcaagaaaaacaagatcgtcagcttcttaggtaccgcctcgatgctc
tcgcctgagaacggcgcgcaccgggtcgaagtgaagggcgaggagaccagggtggtcacg
gggaggaaggtgatcatcgccaccggcagcgaagcggtgcaggtcccgacgcttccgttt
gacggcgaatcggtggtgagcgcccgcgaggcgctttcgttcccggcggtccccgagcac
ctcctggtggtcggcggcggctacatcggcctcgagctggggtccgtgtggctccggctg
ggcgcgaaggtgaccgtggtggaactgctccccaggctggtcgccgggagcgacggccag
gtggccgaagccctgctgcgatccctgaaaaagcaggggatgaccttcatgctgggggcc
aaggtcgccggggcggaaaagaaggacggcaagctcctggcgcgcgtcgaggccgagggg
gagaccgcggagattgcgtgcgacaaggttctcgtcgcggtggggcgcaggccgctcacc
gcggggctaaatctcgaagggatcggggtccgcatggacggcagccgcatcagcgtcgac
gccgactacgccaccagcgtccccgggatctacgccctcggcgacctcatcgcgggcccc
atgctggcgcacaaggcgatggaggagggggccgtctgcgtggaaaggatgcacggcgag
ccgagccaggtcgattacggctgcatccccggtgtctgctacacctggcccgaggcggcc
tcggtgggtaagaccgaggaggcgctcaaggaagagggaatcgcctacaaggtcggcaag
ttcagcttcatcgccaacgggcgcgccaagtgcatggacgagaccgaggggttcgtcaag
cttctcaccgaagcggagggggggcggctgctcggtgtgcatatcctcgggccgcgcgcc
tctgacatgatcgccgaggcagtcaccgtgatggctttcggcggcagcggcgaagacatt
gccctcaccgtgcacggccatcccaccctctccgaggtgatgaaggaggcggcgctcgac
ctggacaagcgcgccatccacggctga
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