KEGG   Geomonas subterranea: KP001_12625
Entry
KP001_12625       CDS       T07936                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
gsub  Geomonas subterranea
Pathway
gsub00010  Glycolysis / Gluconeogenesis
gsub00020  Citrate cycle (TCA cycle)
gsub00260  Glycine, serine and threonine metabolism
gsub00280  Valine, leucine and isoleucine degradation
gsub00310  Lysine degradation
gsub00380  Tryptophan metabolism
gsub00620  Pyruvate metabolism
gsub00630  Glyoxylate and dicarboxylate metabolism
gsub00640  Propanoate metabolism
gsub00670  One carbon pool by folate
gsub00785  Lipoic acid metabolism
gsub01100  Metabolic pathways
gsub01110  Biosynthesis of secondary metabolites
gsub01120  Microbial metabolism in diverse environments
gsub01200  Carbon metabolism
gsub01210  2-Oxocarboxylic acid metabolism
gsub01240  Biosynthesis of cofactors
Module
gsub_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gsub_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gsub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
gsub_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:gsub00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KP001_12625 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KP001_12625 (lpdA)
   00620 Pyruvate metabolism
    KP001_12625 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KP001_12625 (lpdA)
   00640 Propanoate metabolism
    KP001_12625 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KP001_12625 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KP001_12625 (lpdA)
   00310 Lysine degradation
    KP001_12625 (lpdA)
   00380 Tryptophan metabolism
    KP001_12625 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KP001_12625 (lpdA)
   00670 One carbon pool by folate
    KP001_12625 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gsub04147]
    KP001_12625 (lpdA)
Enzymes [BR:gsub01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KP001_12625 (lpdA)
Exosome [BR:gsub04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KP001_12625 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_oxidored FAD_binding_2 NAD_binding_8 GIDA DAO Thi4 FAD_binding_3 AlaDh_PNT_C 3HCDH_N UDPG_MGDP_dh_N VCIP135_N Lycopene_cycl
Other DBs
NCBI-ProteinID: QXE89303
LinkDB
Position
complement(2903984..2905390)
AA seq 468 aa
MSEEIFDLIVIGAGPGGYVAAIRGAQLGMKVAVVEKRGSMGGVCLNEGCIPSKALLDSSE
LYHLARDRFAVHGIEVQPPTLNLGQMMARKDDVVKKLTDGIAFLFKKNKIVSFLGTASML
SPENGAHRVEVKGEETRVVTGRKVIIATGSEAVQVPTLPFDGESVVSAREALSFPAVPEH
LLVVGGGYIGLELGSVWLRLGAKVTVVELLPRLVAGSDGQVAEALLRSLKKQGMTFMLGA
KVAGAEKKDGKLLARVEAEGETAEIACDKVLVAVGRRPLTAGLNLEGIGVRMDGSRISVD
ADYATSVPGIYALGDLIAGPMLAHKAMEEGAVCVERMHGEPSQVDYGCIPGVCYTWPEAA
SVGKTEEALKEEGIAYKVGKFSFIANGRAKCMDETEGFVKLLTEAEGGRLLGVHILGPRA
SDMIAEAVTVMAFGGSGEDIALTVHGHPTLSEVMKEAALDLDKRAIHG
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtccgaagaaattttcgatctcatagtcatcggcgccggccccggcggatacgtcgcc
gccatcaggggcgcccaactcggcatgaaggtggccgtggtggaaaaacgcggctccatg
ggtggcgtctgcctgaacgagggatgcatccccagcaaggcgcttctcgactccagcgaa
ctgtaccacctcgccagggaccgcttcgccgtccacggcatcgaggtgcagcccccgacc
ctcaacctcgggcagatgatggcccgcaaggatgacgtggtcaagaagctcaccgacggc
atcgcgttcctcttcaagaaaaacaagatcgtcagcttcttaggtaccgcctcgatgctc
tcgcctgagaacggcgcgcaccgggtcgaagtgaagggcgaggagaccagggtggtcacg
gggaggaaggtgatcatcgccaccggcagcgaagcggtgcaggtcccgacgcttccgttt
gacggcgaatcggtggtgagcgcccgcgaggcgctttcgttcccggcggtccccgagcac
ctcctggtggtcggcggcggctacatcggcctcgagctggggtccgtgtggctccggctg
ggcgcgaaggtgaccgtggtggaactgctccccaggctggtcgccgggagcgacggccag
gtggccgaagccctgctgcgatccctgaaaaagcaggggatgaccttcatgctgggggcc
aaggtcgccggggcggaaaagaaggacggcaagctcctggcgcgcgtcgaggccgagggg
gagaccgcggagattgcgtgcgacaaggttctcgtcgcggtggggcgcaggccgctcacc
gcggggctaaatctcgaagggatcggggtccgcatggacggcagccgcatcagcgtcgac
gccgactacgccaccagcgtccccgggatctacgccctcggcgacctcatcgcgggcccc
atgctggcgcacaaggcgatggaggagggggccgtctgcgtggaaaggatgcacggcgag
ccgagccaggtcgattacggctgcatccccggtgtctgctacacctggcccgaggcggcc
tcggtgggtaagaccgaggaggcgctcaaggaagagggaatcgcctacaaggtcggcaag
ttcagcttcatcgccaacgggcgcgccaagtgcatggacgagaccgaggggttcgtcaag
cttctcaccgaagcggagggggggcggctgctcggtgtgcatatcctcgggccgcgcgcc
tctgacatgatcgccgaggcagtcaccgtgatggctttcggcggcagcggcgaagacatt
gccctcaccgtgcacggccatcccaccctctccgaggtgatgaaggaggcggcgctcgac
ctggacaagcgcgccatccacggctga

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